Jonathan Ozik

Computational Scientist





de Lima PN, Lempert R, Vardavas R, Baker L, Ringel J, Rutter CM, Ozik J, Collier N. (2021). Reopening California : Seeking Robust, Non-Dominated COVID-19 Exit Strategies. medRxiv : the preprint server for health sciences

Khanna AS, Edali M, Ozik J, Collier N, Hotton A, Skwara A, Ardestani BM, Brewer R, Fujimoto K, Harawa N, Schneider JA. (2021). Projecting the number of new HIV infections to formulate the "Getting to Zero" strategy in Illinois, USA. Mathematical biosciences and engineering : MBE, 18(4)

Hotton AL, Chen YT, Schumm P, Khanna AS, Brewer R, Skaathun B, Issema RS, Ramani S, Ramachandran A, Ozik J, Fujimoto K, Harawa NT, Schneider JA. (2020). Socio-Structural and Neighborhood Predictors of Incident Criminal Justice Involvement in a Population-Based Cohort of Young Black MSM and Transgender Women. Journal of urban health : bulletin of the New York Academy of Medicine

Getz M, Wang Y, An G, Asthana M, Becker A, Cockrell C, Collier N, Craig M, Davis CL, Faeder JR, Versypt ANF, Mapder T, Gianlupi JF, Glazier JA, Hamis S, Heiland R, Hillen T, Hou D, Islam MA, Jenner AL, Kurtoglu F, Larkin CI, Liu B, Macfarlane F, Maygrundter P, Morel PA, Narayanan A, Ozik J, Pienaar E, Rangamani P, Saglam AS, Shoemaker JE, Smith AM, Weaver JJA, Macklin P. (2020). Rapid community-driven development of a SARS-CoV-2 tissue simulator. bioRxiv : the preprint server for biology

Pagkas-Bather J, Ozik J, Millett G, Schneider JA. (2020). The last Black man with HIV in San Francisco: the potential role of gentrification on HIV getting to zero achievements. The lancet. HIV, 7(12)

Tung EL, Abramsohn EM, Boyd K, Makelarski JA, Beiser DG, Chou C, Huang ES, Ozik J, Kaligotla C, Lindau ST. (2020). Impact of a Low-Intensity Resource Referral Intervention on Patients' Knowledge, Beliefs, and Use of Community Resources: Results from the CommunityRx Trial. Journal of general internal medicine, 35(3)

Echevarria D, Gutfraind A, Boodram B, Layden J, Ozik J, Page K, Cotler SJ, Major M, Dahari H. (2019). Modeling indicates efficient vaccine-based interventions for the elimination of hepatitis C virus among persons who inject drugs in metropolitan Chicago. Vaccine, 37(19)

Khanna AS, Schneider JA, Collier N, Ozik J, Issema R, di Paola A, Skwara A, Ramachandran A, Webb J, Brewer R, Cunningham W, Hilliard C, Ramani S, Fujimoto K, Harawa N, . (2019). A modeling framework to inform preexposure prophylaxis initiation and retention scale-up in the context of 'Getting to Zero' initiatives. AIDS (London, England), 33(12)

Tatara E, Collier NT, Ozik J, Gutfraind A, Cotler SJ, Dahari H, Major M, Boodram B. (2019). MULTI-OBJECTIVE MODEL EXPLORATION OF HEPATITIS C ELIMINATION IN AN AGENT-BASED MODEL OF PEOPLE WHO INJECT DRUGS. Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference, (2019)

Ozik J, Collier N, Heiland R, An G, Macklin P. (2019). Learning-accelerated discovery of immune-tumour interactions. Molecular systems design & engineering, 4(4)

Ozik J, Collier N, Wozniak JM, Macal C, Cockrell C, Friedman SH, Ghaffarizadeh A, Heiland R, An G, Macklin P. (2018). High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC Bioinformatics, 19(Suppl 18)

Wozniak JM, Jain R, Balaprakash P, Ozik J, Collier NT, Bauer J, Xia F, Brettin T, Stevens R, Mohd-Yusof J, Cardona CG, Essen BV, Baughman M. (2018). CANDLE/Supervisor: a workflow framework for machine learning applied to cancer research. BMC bioinformatics, 19(Suppl 18)

Ozik J, Collier NT, Wozniak JM, Macal C, An G. (2018). Extreme-scale Dynamic Exploration of a Distributed Agent-based Model with the EMEWS Framework. IEEE transactions on computational social systems, 5(3)

Ozik J, Collier NT, Wozniak JM, Spagnuolo C. (2016). FROM DESKTOP TO LARGE-SCALE MODEL EXPLORATION WITH SWIFT/T. Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference, (2016)

Jonathan Ozik, Nicholson Collier, Todd Combs, Charles M. Macal, and Michael North. (2015). Repast Simphony Statecharts. Journal of Artificial Societies and Social Simulation, 18(3)

Jonathan Ozik, Nicholson T. Collier, John T. Murphy, Mark Altaweel, Richard B. Lammers, Alexander A. Prusevich, Andrew D. Kliskey, and Lilian N. Alessa. (2014). Simulating Water, Individuals, and Management using a coupled and distributed approach. Proceedings of the 2014 Winter Simulation Conference

Ozik, Jonathan, Nicholson T. Collier, John T. Murphy, and Michael J. North.. (2013). The ReLogo agent-based modeling language. 2013 Winter Simulations Conference (WSC)

Ozik J, Hunt BR, Ott E. (2005). Formation of multifractal population patterns from reproductive growth and local resettlement. Physical review. E, Statistical, nonlinear, and soft matter physics, 72(4 Pt 2)

Ozik J, Hunt BR, Ott E. (2004). Growing networks with geographical attachment preference: emergence of small worlds. Physical review. E, Statistical, nonlinear, and soft matter physics, 69(2 Pt 2)

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