Papers

Bayesian phylodynamic inference with complex models.

PLoS computational biology
Volz EM, Siveroni I
2018-11-01

Dengue seroprevalence in a cohort of schoolchildren and their siblings in Yucatan, Mexico (2015-2016).

PLoS neglected tropical diseases
Pavía-Ruz N, Barrera-Fuentes GA, Villanueva-Jorge S, Che-Mendoza A, Campuzano-Rincón JC, Manrique-Saide P, Rojas DP, Vazquez-Prokopec GM, Halloran ME, Longini IM, Gómez-Dantés H
2018-11-01

Inflammatory Mediator Expression Associated With Antibody Response Induced by Live Attenuated vs Inactivated Influenza Virus Vaccine in Children.

Open forum infectious diseases
Martin JM, Avula R, Nowalk MP, Lin CJ, Horne WT, Chandran UR, Nagg JP, Zimmerman RK, Cole KS, Alcorn JF
2018-11-01

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci.

PLoS pathogens
Azarian T, Mitchell PK, Georgieva M, Thompson CM, Ghouila A, Pollard AJ, von Gottberg A, du Plessis M, Antonio M, Kwambana-Adams BA, Clarke SC, Everett D, Cornick J, Sadowy E, Hryniewicz W, Skoczynska A, Moïsi JC, McGee L, Beall B, Metcalf BJ, Breiman RF, Ho PL, Reid R, O’Brien KL, Gladstone RA, Bentley SD, Hanage WP
2018-11-01

The economic value of identifying and treating Chagas disease patients earlier and the impact on Trypanosoma cruzi transmission.

PLoS neglected tropical diseases
Bartsch SM, Avelis CM, Asti L, Hertenstein DL, Ndeffo-Mbah M, Galvani A, Lee BY
2018-11-01

Hidden cost of disease in a free-ranging ungulate: brucellosis reduces mid-winter pregnancy in elk.

Ecology and evolution
Cotterill GG, Cross PC, Middleton AD, Rogerson JD, Scurlock BM, du Toit JT
2018-11-01

Estimation of Pneumonic Plague Transmission in Madagascar, August-November 2017.

PLoS currents
Majumder MS, Cohn EL, Santillana M, Brownstein JS
2018-11-01

Nonannual seasonality of influenza-like illness in a tropical urban setting

Influenza and Other Respiratory Viruses
Ha Minh Lam, Amy Wesolowski, Nguyen Thanh Hung, Tran Dang Nguyen, Nguyen Thi Duy Nhat, Stacy Todd, Dao Nguyen Vinh, Nguyen Ha Thao Vy, Tran Thi Nhu Thao, Nguyen Thi Le Thanh, Phan Tri Tin, Ngo Ngoc Quang Minh, Juliet E Bryant, Caroline O Buckee, Tran Van Ngoc, Nguyen Van Vinh Chau, Guy E Thwaites, Jeremy Farrar, Dong Thi Hoai Tam, Ha Vinh, Maciej F Boni
2018-11-01

Using spatiotemporal models to generate synthetic data for public use.

Spatial and spatio-temporal epidemiology
Quick H, Waller LA
2018-11-01

HIV, Sexually Transmitted Infection, and Substance Use Continuum of Care Interventions Among Criminal Justice-Involved Black Men Who Have Sex With Men: A Systematic Review.

American journal of public health
Harawa NT, Brewer R, Buckman V, Ramani S, Khanna A, Fujimoto K, Schneider JA
2018-11-01

Seasonal and interannual risks of dengue introduction from South-East Asia into China, 2005-2015.

PLoS neglected tropical diseases
Lai S, Johansson MA, Yin W, Wardrop NA, van Panhuis WG, Wesolowski A, Kraemer MUG, Bogoch II, Kain D, Findlater A, Choisy M, Huang Z, Mu D, Li Y, He Y, Chen Q, Yang J, Khan K, Tatem AJ, Yu H
2018-11-01

Hydrometeorology and flood pulse dynamics drive diarrheal disease outbreaks and increase vulnerability to climate change in surface-water-dependent populations: A retrospective analysis.

PLoS medicine
Alexander KA, Heaney AK, Shaman J
2018-11-01

From bacterial genomics to clinical epidemiology: an interview with Bill Hanage.

BMC biology
Hanage WP
2018-11-01

Epidemiology of dengue and other arboviruses in a cohort of school children and their families in Yucatan, Mexico: Baseline and first year follow-up.

PLoS neglected tropical diseases
Rojas DP, Barrera-Fuentes GA, Pavia-Ruz N, Salgado-Rodriguez M, Che-Mendoza A, Manrique-Saide P, Vazquez-Prokopec GM, Halloran ME, Longini IM, Gomez-Dantes H
2018-11-01

The temporal network of mobile phone users in Changchun Municipality, Northeast China.

Scientific data
Du Z, Yang Y, Gao C, Huang L, Huang Q, Bai Y
2018-10-30

Challenges and Opportunities Developing Mathematical Models of Shared Pathogens of Domestic and Wild Animals.

Veterinary sciences
Huyvaert KP, Russell RE, Patyk KA, Craft ME, Cross PC, Garner MG, Martin MK, Nol P, Walsh DP
2018-10-30

Influenza Vaccine Effectiveness and Statin Use Among Adults in the United States, 2011-2017.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Havers FP, Chung JR, Belongia EA, McLean HQ, Gaglani M, Murthy K, Zimmerman RK, Nowalk MP, Jackson ML, Jackson LA, Monto AS, Petrie JG, Fry AM, Flannery B
2018-10-30

MIDAS