Papers

Identifying wildlife reservoirs of neglected taeniid tapeworms: Non-invasive diagnosis of endemic Taenia serialis infection in a wild primate population.

PLoS neglected tropical diseases
Schneider-Crease I, Griffin RH, Gomery MA, Dorny P, Noh JC, Handali S, Chastain HM, Wilkins PP, Nunn CL, Snyder-Mackler N, Beehner JC, Bergman TJ
2017-07-01

Selection on non-antigenic gene segments of seasonal influenza A virus and its impact on adaptive evolution.

Virus evolution
Raghwani J, Thompson RN, Koelle K
2017-07-01

Anticipating the emergence of infectious diseases.

Journal of the Royal Society, Interface
Brett TS, Drake JM, Rohani P
2017-07-01

Acceptability and Feasibility of Using a Novel Geospatial Method to Measure Neighborhood Contexts and Mobility Among Transgender Women in New York City.

Transgender health
Goedel WC, Reisner SL, Janssen AC, Poteat TC, Regan SD, Kreski NT, Confident G, Duncan DT
2017-07-01

Advances in using Internet searches to track dengue.

PLoS computational biology
Yang S, Kou SC, Lu F, Brownstein JS, Brooke N, Santillana M
2017-07-01

Climate services for health: predicting the evolution of the 2016 dengue season in Machala, Ecuador.

The Lancet. Planetary health
Lowe R, Stewart-Ibarra AM, Petrova D, García-Díez M, Borbor-Cordova MJ, Mejía R, Regato M, Rodó X
2017-07-01

Phylodynamic analysis to inform prevention efforts in mixed HIV epidemics.

Virus evolution
Volz EM, Ndembi N, Nowak R, Kijak GH, Idoko J, Dakum P, Royal W, Baral S, Dybul M, Blattner WA, Charurat M
2017-07-01

Correction: Parameter estimation for multistage clonal expansion models from cancer incidence data: A practical identifiability analysis.

PLoS computational biology
Brouwer AF, Meza R, Eisenberg MC
2017-07-01

Correction: Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.

PLoS biology
Blanquart F, Wymant C, Cornelissen M, Gall A, Bakker M, Bezemer D, Hall M, Hillebregt M, Ong SH, Albert J, Bannert N, Fellay J, Fransen K, Gourlay AJ, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos R, Laeyendecker O, Liitsola K, Meyer L, Porter K, Ristola M, van Sighem A, Vanham G, Berkhout B, Kellam P, Reiss P, Fraser C,
2017-07-01

Deliberately increased network connectance in a plant-pollinator community experiment

Journal of Complex Networks
Russo, L.A., and Shea, K.
2017-07-01

Speciation trajectories in recombining bacterial species.

PLoS computational biology
Marttinen P, Hanage WP
2017-07-01

Modern-day SIV viral diversity generated by extensive recombination and cross-species transmission

PLoS Pathogens
Bell SM, Bedford T
2017-07-01

HTM Departments Should Operate like a Business.

Biomedical instrumentation & technology
Cohen T
2017-07-01

Experimental adaptation of human echovirus 11 to ultraviolet radiation leads to resistance to disinfection and ribavirin.

Virus evolution
Carratalà A, Shim H, Zhong Q, Bachmann V, Jensen JD, Kohn T
2017-07-01

Systematic analysis of protein identity between Zika virus and other arthropod-borne viruses.

Bulletin of the World Health Organization
Chang HH, Huber RG, Bond PJ, Grad YH, Camerini D, Maurer-Stroh S, Lipsitch M
2017-07-01

The Combined Effect of Oseltamivir and Favipiravir on Influenza A Virus Evolution.

Genome biology and evolution
Ormond L, Liu P, Matuszewski S, Renzette N, Bank C, Zeldovich K, Bolon DN, Kowalik TF, Finberg RW, Jensen JD, Wang JP
2017-07-01

Mosquitoes on a plane: Disinsection will not stop the spread of vector-borne pathogens, a simulation study.

PLoS neglected tropical diseases
Mier-Y-Teran-Romero L, Tatem AJ, Johansson MA
2017-07-01

Temperature modulates dengue virus epidemic growth rates through its effects on reproduction numbers and generation intervals.

PLoS neglected tropical diseases
Siraj AS, Oidtman RJ, Huber JH, Kraemer MUG, Brady OJ, Johansson MA, Perkins TA
2017-07-01

SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology.

Microbial genomics
Petkau A, Mabon P, Sieffert C, Knox NC, Cabral J, Iskander M, Iskander M, Weedmark K, Zaheer R, Katz LS, Nadon C, Reimer A, Taboada E, Beiko RG, Hsiao W, Brinkman F, Graham M, Van Domselaar G
2017-06-30

Rural and urban injection drug use in Puerto Rico: Network implications for human immunodeficiency virus and hepatitis C virus infection.

Journal of ethnicity in substance abuse
Thrash C, Welch-Lazoritz M, Gauthier G, Khan B, Abadie R, Dombrowski K, De Leon SM, Rolon Colon Y
2017-06-30

MIDAS