Papers

Big data and simple models used to track the spread of COVID-19 in cities.

Nature
Ma KC, Lipsitch M
2020-11-10

Mobility network models of COVID-19 explain inequities and inform reopening.

Nature
Chang S, Pierson E, Koh PW, Gerardin J, Redbird B, Grusky D, Leskovec J
2020-11-10

Evaluating post-vaccine expansion patterns of pneumococcal serotypes.

Vaccine
Phillips MT, Warren JL, Givon-Lavi N, Tothpal A, Regev-Yochay G, Dagan R, Weinberger DM
2020-11-10

High-resolution estimates of tuberculosis incidence among non-U.S.-born persons residing in the United States, 2000-2016.

Epidemics
Hill AN, Cohen T, Salomon JA, Menzies NA
2020-11-10

A novel systems biology approach to evaluate mouse models of late-onset Alzheimer’s disease.

Molecular neurodegeneration
Preuss C, Pandey R, Piazza E, Fine A, Uyar A, Perumal T, Garceau D, Kotredes KP, Williams H, Mangravite LM, Lamb BT, Oblak AL, Howell GR, Sasner M, Logsdon BA, , Carter GW
2020-11-10

A mixture model to assess the the immunogenicity of an oral rotavirus vaccine among healthy infants in Niger.

Vaccine
Hitchings MDT, Cummings DAT, Grais RF, Isanaka S
2020-11-10

Examining association between cohesion and diversity in collaboration networks of pharmaceutical clinical trials with drug approvals.

Journal of the American Medical Informatics Association : JAMIA
Lin G, Siddiqui S, Bernstein J, Martinez DA, Gardner L, Albright T, Igusa T
2020-11-10

Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data.

Journal of the American Medical Informatics Association : JAMIA
Bian J, Lyu T, Loiacono A, Viramontes TM, Lipori G, Guo Y, Wu Y, Prosperi M, George TJ, Harle CA, Shenkman EA, Hogan W
2020-11-10

The impact of COVID-19 nonpharmaceutical interventions on the future dynamics of endemic infections.

Proceedings of the National Academy of Sciences of the United States of America
Baker RE, Park SW, Yang W, Vecchi GA, Metcalf CJE, Grenfell BT
2020-11-09

Estimates of inactivated influenza vaccine effectiveness among children in Senegal: results from two consecutive cluster-randomized controlled trials in 2010 and 2011.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Niang MN, Sugimoto JD, Diallo A, Diarra B, Ortiz JR, Lewis KDC, Lafond KE, Halloran ME, Widdowson MA, Neuzil KM, Victor JC
2020-11-09

Inhibitory KIR ligands are associated with higher P. falciparum parasite prevalence.

The Journal of infectious diseases
Digitale JC, Callaway PC, Martin M, Nelson G, Viard M, Rek J, Arinaitwe E, Dorsey G, Kamya M, Carrington M, Rodriguez-Barraquer I, Feeney ME
2020-11-09

Socio-economic disparities in social distancing during the COVID-19 pandemic in the United States.

medRxiv : the preprint server for health sciences
Garnier R, Benetka JR, Kraemer J, Bansal S
2020-11-09

Real-time, interactive website for US-county-level COVID-19 event risk assessment

Nature Human Behavior
Chande A., Lee S., Harris M., Nguyen Q.†, Beckett S.J., Hilley T., Andris C., Weitz J.S.
2020-11-09

Optimal COVID-19 quarantine and testing strategies.

medRxiv : the preprint server for health sciences
Wells CR, Townsend JP, Pandey A, Moghadas SM, Krieger G, Singer B, McDonald RH, Fitzpatrick MC, Galvani AP
2020-11-08

Differential effects of intervention timing on COVID-19 spread in the United States.

Science advances
Pei S, Kandula S, Shaman J
2020-11-08

Single-Cell Profiling of Ebola Virus Disease In Vivo Reveals Viral and Host Dynamics.

Cell
Kotliar D, Lin AE, Logue J, Hughes TK, Khoury NM, Raju SS, Wadsworth MH 2nd., Chen H, Kurtz JR, Dighero-Kemp B, Bjornson ZB, Mukherjee N, Sellers BA, Tran N, Bauer MR, Adams GC, Adams R, Rinn JL, Melé M, Schaffner SF, Nolan GP, Barnes KG, Hensley LE, McIlwain DR, Shalek AK, Sabeti PC, Bennett RS
2020-11-08

The Effect of SARS-CoV-2 Mitigation Strategies on Seasonal Respiratory Viruses: A Tale of Two Large Metropolitan Centers in the United States.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Sherman AC, Babiker A, Sieben AJ, Pyden A, Steinberg J, Kraft CS, Koelle K, Kanjilal S
2020-11-08

MIDAS