Papers

Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918.

Proceedings of the National Academy of Sciences of the United States of America
Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DA
2016-11-23

Alignment-free Transcriptomic and Metatranscriptomic Comparison Using Sequencing Signatures with Variable Length Markov Chains.

Scientific reports
Liao W, Ren J, Wang K, Wang S, Zeng F, Wang Y, Sun F
2016-11-23

Time series analysis of malaria in Afghanistan: using ARIMA models to predict future trends in incidence.

Malaria journal
Anwar MY, Lewnard JA, Parikh S, Pitzer VE
2016-11-22

Seasonal Population Movements and the Surveillance and Control of Infectious Diseases.

Trends in parasitology
Buckee CO, Tatem AJ, Metcalf CJE
2016-11-21

Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999-2009.

BMC Genomics
Brown TS, Narechania A, Walker JR, Planet PJ, Bifani PJ, Kolokotronis SO, Kreiswirth BN, Mathema B
2016-11-21

On the (un)predictability of a large intragenic fitness landscape.

Proceedings of the National Academy of Sciences of the United States of America
Bank C, Matuszewski S, Hietpas RT, Jensen JD
2016-11-20

Optimal frequency of rabies vaccination campaigns in Sub-Saharan Africa.

Proceedings. Biological sciences
Bilinski AM, Fitzpatrick MC, Rupprecht CE, Paltiel AD, Galvani AP
2016-11-16

Forecasting Epidemiological Consequences of Maternal Immunization.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Bento AI, Rohani P
2016-11-14

Fractional dosing of yellow fever vaccine to extend supply: a modelling study.

Lancet (London, England)
Wu JT, Peak CM, Leung GM, Lipsitch M
2016-11-14

Mathematical model of Ebola transmission dynamics with relapse and reinfection.

Mathematical biosciences
Agusto FB
2016-11-12

Local variations in the timing of RSV epidemics.

BMC infectious diseases
Noveroske DB, Warren JL, Pitzer VE, Weinberger DM
2016-11-11

Potent protection against H5N1 and H7N9 influenza via childhood hemagglutinin imprinting.

Science (New York, N.Y.)
Gostic KM, Ambrose M, Worobey M, Lloyd-Smith JO
2016-11-11

First flu is forever.

Science (New York, N.Y.)
Viboud C, Epstein SL
2016-11-11

Viral factors in influenza pandemic risk assessment.

Elife
Lipsitch M, Barclay W, Raman R, Russell CJ, Belser JA, Cobey S, Kasson PM, Lloyd-Smith JO, Maurer-Stroh S, Riley S, Beauchemin CA, Bedford T, Friedrich TC, Handel A, Herfst S, Murcia PR, Roche B, Wilke CO, Russell CA
2016-11-11

Antimicrobial Stewardship and Environmental Decontamination for the Control of Clostridium difficile Transmission in Healthcare Settings.

Bulletin of mathematical biology
Bintz J, Lenhart S, Lanzas C
2016-11-09

How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study.

Proceedings of the National Academy of Sciences of the United States of America
Salje H, Lessler J, Paul KK, Azman AS, Rahman MW, Rahman M, Cummings D, Gurley ES, Cauchemez S
2016-11-09

Targeting pediatric versus elderly populations for norovirus vaccines: a model-based analysis of mass vaccination options.

Epidemics
Steele MK, Remais JV, Gambhir M, Glasser JW, Handel A, Parashar UD, Lopman BA
2016-11-09

The hidden societal cost of antibiotic resistance per antibiotic prescribed in the United States: an exploratory analysis.

BMC Infectious Diseases
Michaelidis CI, Fine MJ, Lin CJ, Linder JA, Nowalk MP, Shields RK, Zimmerman RK, Smith KJ
2016-11-08

Understanding spatial spread of emerging infectious diseases in contemporary populations: Comment on “Pattern transitions in spatial epidemics: Mechanisms and emergent properties” by Gui-Quan Sun et al.

Physics of life reviews
Li HJ, Cheng Q, Wang L
2016-11-08

Zika virus in Pakistan: the tip of the iceberg?

The Lancet. Global health
Butt AM, Siddique S, Gardner LM, Sarkar S, Lancelot R, Qamar R
2016-11-07

MIDAS