Papers

Approximate Bayesian computation for spatial SEIR(S) epidemic models.

Spatial and spatio-temporal epidemiology
Brown GD, Porter AT, Oleson JJ, Hinman JA
2018-02-01

Spatial and temporal dynamics of malaria in Madagascar.

Malaria journal
Ihantamalala FA, Rakotoarimanana FMJ, Ramiadantsoa T, Rakotondramanga JM, Pennober G, Rakotomanana F, Cauchemez S, Metcalf CJE, Herbreteau V, Wesolowski A
2018-02-01

Optimizing homeostatic cell renewal in hierarchical tissues.

PLoS computational biology
Alvarado C, Fider NA, Wearing HJ, Komarova NL
2018-02-01

When are pathogen genome sequences informative of transmission events?

PLoS pathogens
Campbell F, Strang C, Ferguson N, Cori A, Jombart T
2018-02-01

Deep sequencing of HBV pre-S region reveals high heterogeneity of HBV genotypes and associations of word pattern frequencies with HCC.

PLoS genetics
Bai X, Jia JA, Fang M, Chen S, Liang X, Zhu S, Zhang S, Feng J, Sun F, Gao C
2018-02-01

Interim estimate of influenza vaccine effectiveness in hospitalised children, Hong Kong, 2017/18.

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin
Chiu SS, Kwan MYW, Feng S, Wong JSC, Leung CW, Chan ELY, Peiris JSM, Cowling BJ
2018-02-01

Clinical Age-Specific Seasonal Conjunctivitis Patterns and Their Online Detection in Twitter, Blog, Forum, and Comment Social Media Posts.

Investigative ophthalmology & visual science
Deiner MS, McLeod SD, Chodosh J, Oldenburg CE, Fathy CA, Lietman TM, Porco TC
2018-02-01

Prediction of infectious disease epidemics via weighted density ensembles.

PLoS computational biology
Ray EL, Reich NG
2018-02-01

DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data.

Microbiome
Arango-Argoty G, Garner E, Pruden A, Heath LS, Vikesland P, Zhang L
2018-02-01

Pneumococcal Phenotype and Interaction with Nontypeable Haemophilus influenzae as Determinants of Otitis Media Progression.

Infection and immunity
Lewnard JA, Givon-Lavi N, Tähtinen PA, Dagan R
2018-01-31

Impact of stochastically generated heterogeneity in hazard rates on individually randomized vaccine efficacy trials.

Clinical trials (London, England)
Kahn R, Hitchings M, Bellan S, Lipsitch M
2018-01-30

Knowledge to predict pathogens: Legionella pneumophila lifecycle critical review part I uptake into host cells

Water
Alexis L Mraz, Mark H Weir
2018-01-30

Constrained binary classification using ensemble learning: an application to cost‐efficient targeted PrEP strategies

Statistics in Medicine
Wenjing Zheng, Laura Balzer, Mark van der Laan, Maya Petersen, SEARCH Collaboration
2018-01-30

Resilience management during large-scale epidemic outbreaks.

Scientific reports
Massaro E, Ganin A, Perra N, Linkov I, Vespignani A
2018-01-30

Underestimation of the global burden of schistosomiasis.

Lancet (London, England)
King CH, Galvani AP
2018-01-27

Predicting non-melanoma skin cancer via a multi-parameterized artificial neural network.

Scientific reports
Roffman D, Hart G, Girardi M, Ko CJ, Deng J
2018-01-26

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The American journal of tropical medicine and hygiene
Peterson JK, Salazar R, Castillo-Neyra R, Borrini-Mayori K, Condori C, Bartow-McKenney C, Tracy D, Náquira C, Levy MZ
2018-01-25

Cost-effectiveness of increasing vaccination in high-risk adults aged 18-64 Years: a model-based decision analysis.

BMC infectious diseases
Wateska AR, Nowalk MP, Zimmerman RK, Smith KJ, Lin CJ
2018-01-25

Identifying Financially Sustainable Pricing Interventions to Promote Healthier Beverage Purchases in Small Neighborhood Stores.

Preventing chronic disease
Nau C, Kumanyika S, Gittelsohn J, Adam A, Wong MS, Mui Y, Lee BY
2018-01-25

Influence of Birth Cohort on Effectiveness of 2015-2016 Influenza Vaccine Against Medically Attended Illness Due to 2009 Pandemic Influenza A(H1N1) Virus in the United States.

The Journal of infectious diseases
Flannery B, Smith C, Garten RJ, Levine MZ, Chung JR, Jackson ML, Jackson LA, Monto AS, Martin ET, Belongia EA, McLean HQ, Gaglani M, Murthy K, Zimmerman R, Nowalk MP, Griffin MR, Keipp Talbot H, Treanor JJ, Wentworth DE, Fry AM
2018-01-24

MIDAS