Papers

Single-Cell Analysis of B Cell/Antibody Cross-Reactivity Using a Novel Multicolor FluoroSpot Assay.

Journal of immunology (Baltimore, Md. : 1950)
Hadjilaou A, Green AM, Coloma J, Harris E
2015-09-01

Early Characterization of the Severity and Transmissibility of Pandemic Influenza Using Clinical Episode Data from Multiple Populations.

PLoS computational biology
Riley P, Ben-Nun M, Linker JA, Cost AA, Sanchez JL, George D, Bacon DP, Riley S
2015-09-01

Modeling the effect of HIV coinfection on clearance and sustained virologic response during treatment for hepatitis C virus.

Epidemics
Birger R, Kouyos R, Dushoff J, Grenfell B
2015-09-01

HIV-1 infections with multiple founders are associated with higher viral loads than infections with single founders.

Nature medicine
Janes H, Herbeck JT, Tovanabutra S, Thomas R, Frahm N, Duerr A, Hural J, Corey L, Self SG, Buchbinder SP, McElrath MJ, O’Connell RJ, Paris RM, Rerks-Ngarm S, Nitayaphan S, Pitisuttihum P, Kaewkungwal J, Robb ML, Michael NL, Mullins JI, Kim JH, Gilbert PB, Rolland M
2015-09-01

Vaccination Compliance and the US Measles Epidemic–Reply.

JAMA pediatrics
Majumder MS, Huston JE, Brownstein JS
2015-09-01

Vaccination Compliance and the US Measles Epidemic.

JAMA pediatrics
Blumberg S, Enanoria WT, Porco TC
2015-09-01

EpiCaster: An Integrated Web Application For Situation Assessment and Forecasting of Global Epidemics.

ACM-BCB … … : the … ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine
Deodhar S, Bisset K, Chen J, Barrett C, Wilson M, Marathe M
2015-09-01

Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp.

The ISME journal
Gomez A, Rothman JM, Petrzelkova K, Yeoman CJ, Vlckova K, Umaña JD, Carr M, Modry D, Todd A, Torralba M, Nelson KE, Stumpf RM, Wilson BA, Blekhman R, White BA, Leigh SR
2015-09-01

The velocity of Ebola spread in parts of west Africa.

The Lancet. Infectious diseases
Zinszer K, Morrison K, Anema A, Majumder MS, Brownstein JS
2015-09-01

Positive Selection in CD8+ T-Cell Epitopes of Influenza Virus Nucleoprotein Revealed by a Comparative Analysis of Human and Swine Viral Lineages.

Journal of virology
Machkovech HM, Bedford T, Suchard MA, Bloom JD
2015-08-28

Association Between Local Pediatric Vaccination Rates and Patterns of Pneumococcal Disease in Adults.

The Journal of infectious diseases
Pingali SC, Warren JL, Mead AM, Sharova N, Petit S, Weinberger DM
2015-08-28

Neuroprotection by safinamide in the 6-hydroxydopamine model of Parkinson’s disease.

Neuropathology and applied neurobiology
Sadeghian M, Mullali G, Pocock JM, Piers T, Roach A, Smith KJ
2015-08-25

A mathematical model of the dynamics of prion aggregates with chaperone-mediated fragmentation.

Journal of mathematical biology
Davis JK, Sindi SS
2015-08-25

Social, spatial, and temporal organization in a complex insect society.

Scientific reports
Quevillon LE, Hanks EM, Bansal S, Hughes DP
2015-08-24

Improving Accuracy of Influenza-Associated Hospitalization Rate Estimates.

Emerging infectious diseases
Millman AJ, Reed C, Kirley PD, Aragon D, Meek J, Farley MM, Ryan P, Collins J, Lynfield R, Baumbach J, Zansky S, Bennett NM, Fowler B, Thomas A, Lindegren ML, Atkinson A, Finelli L, Chaves SS
2015-08-21

Mathematical Modeling of Hepatitis C Prevalence Reduction with Antiviral Treatment Scale-Up in Persons Who Inject Drugs in Metropolitan Chicago.

PLoS One
Echevarria D, Gutfraind A, Boodram B, Major M, Del Valle S, Cotler SJ, Dahari H
2015-08-21

Four Degrees of Separation: Social Contacts and Health Providers Influence the Steps to Final Diagnosis of Active Tuberculosis Patients in Urban Uganda.

BMC infectious diseases
Sekandi JN, Zalwango S, Martinez L, Handel A, Kakaire R, Nkwata AK, Ezeamama AE, Kiwanuka N, Whalen CC
2015-08-21

Quantifying seasonal population fluxes driving rubella transmission dynamics using mobile phone data.

Proceedings of the National Academy of Sciences of the United States of America
Wesolowski A, Metcalf CJ, Eagle N, Kombich J, Grenfell BT, Bjørnstad ON, Lessler J, Tatem AJ, Buckee CO
2015-08-19

Integrating immune mechanisms to model nematode worm burden: an example in sheep.

Parasitology
Garnier R, Grenfell BT, Nisbet AJ, Matthews JB, Graham AL
2015-08-19

Effects of selection pressure and genetic association on the relationship between antibiotic resistance and virulence in Escherichia coli.

Antimicrobial agents and chemotherapy
Zhang L, Levy K, Trueba G, Cevallos W, Trostle J, Foxman B, Marrs CF, Eisenberg JN
2015-08-19

MIDAS