Papers

Model analysis of fomite mediated influenza transmission.

PLoS One
Zhao J, Eisenberg JE, Spicknall IH, Li S, Koopman JS
2012-12-27

Phylodynamic inference and model assessment with approximate bayesian computation: influenza as a case study.

PLoS computational biology
Ratmann O, Donker G, Meijer A, Fraser C, Koelle K
2012-12-27

Clinical characteristics of norovirus-associated deaths: a systematic literature review.

American journal of infection control
Trivedi TK, Desai R, Hall AJ, Patel M, Parashar UD, Lopman BA
2012-12-26

Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.

Proceedings of the National Academy of Sciences of the United States of America
Grad YH, Lipsitch M, Griggs AD, Haas BJ, Shea TP, McCowan C, Montmayeur A, FitzGerald M, Wortman JR, Krogfelt KA, Bingen E, Weill FX, Tietze E, Flieger A, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP
2012-12-26

Novel framework for assessing epidemiologic effects of influenza epidemics and pandemics.

Emerging infectious diseases
Reed C, Biggerstaff M, Finelli L, Koonin LM, Beauvais D, Uzicanin A, Plummer A, Bresee J, Redd SC, Jernigan DB
2012-12-25

Clusters of poverty and disease emerge from feedbacks on an epidemiological network.

Journal of the Royal Society, Interface
Pluciński MM, Ngonghala CN, Getz WM, Bonds MH
2012-12-21

Is 2 a “high number of partners”? Modeling, data, and the power of concurrency.

Sexually transmitted diseases
Goodreau SM
2012-12-20

Understanding triphasic HCV decline during treatment in the era of IL28B polymorphisms and direct acting antiviral agents via mathematical modeling.

Journal of hepatology
Dahari H, Cotler SJ, Layden TJ, Perelson AS
2012-12-19

The impact of bed-net use on malaria prevalence.

Journal of theoretical biology
Agusto FB, Del Valle SY, Blayneh KW, Ngonghala CN, Goncalves MJ, Li N, Zhao R, Gong H
2012-12-19

Sex, drugs, and race: how behaviors differentially contribute to the sexually transmitted infection risk network structure.

American journal of public health
Adams J, Moody J, Morris M
2012-12-15

Unraveling the effects of selection and demography on immune gene variation in free-ranging plains zebra (Equus quagga) populations.

PloS one
Kamath PL, Getz WM
2012-12-14

Pathogen diversity and hidden regimes of apparent competition.

The American naturalist
Cobey S, Lipsitch M
2012-12-14

Quantitative assessment of mitochondrial DNA copies from whole genome sequencing.

BMC genomics
Chu HT, Hsiao WW, Tsao TT, Chang CM, Liu YW, Fan CC, Lin H, Chang HH, Yeh TJ, Chen JC, Huang DM, Chen CC, Kao CY
2012-12-13

Real-time numerical forecast of global epidemic spreading: case study of 2009 A/H1N1pdm.

BMC medicine
Tizzoni M, Bajardi P, Poletto C, Ramasco JJ, Balcan D, Gonçalves B, Perra N, Colizza V, Vespignani A
2012-12-13

Influenza infection rates, measurement errors and the interpretation of paired serology.

PLoS pathogens
Cauchemez S, Horby P, Fox A, Mai le Q, Thanh le T, Thai PQ, Hoa le NM, Hien NT, Ferguson NM
2012-12-13

Antituberculosis drug resistance acquired during treatment: an analysis of cases reported in California, 1994-2006.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Porco TC, Oh P, Flood JM
2012-12-12

Age- and sex-specific mortality associated with the 1918-1919 influenza pandemic in Kentucky.

The Journal of infectious diseases
Viboud C, Eisenstein J, Reid AH, Janczewski TA, Morens DM, Taubenberger JK
2012-12-12

Preventing pandemics via international development: a systems approach.

PLoS medicine
Bogich TL, Chunara R, Scales D, Chan E, Pinheiro LC, Chmura AA, Carroll D, Daszak P, Brownstein JS
2012-12-11

When does overuse of antibiotics become a tragedy of the commons?

PLoS One
Porco TC, Gao D, Scott JC, Shim E, Enanoria WT, Galvani AP, Lietman TM
2012-12-07

Digital surveillance: a novel approach to monitoring the illegal wildlife trade.

PLoS One
Sonricker Hansen AL, Li A, Joly D, Mekaru S, Brownstein JS
2012-12-07

MIDAS