Papers

Drug Susceptibility Patterns in MDR-TB Patients: Challenges for Future Regimen Design. A Cross-Sectional Study.

PLoS One
Stagg HR, Brown J, Ibraim E, Riekstiņa V, Viiklepp P, Cīrule A, Cocei H, Danilovitš M, Dravniece G, Jackson C, White PJ
2015-11-11

The Nicaraguan pediatric influenza cohort study: design, methods, use of technology, and compliance.

BMC infectious diseases
Gordon A, Kuan G, Aviles W, Sanchez N, Ojeda S, Lopez B, Gresh L, Balmaseda A, Harris E
2015-11-09

Transmission network of the 2014-2015 Ebola epidemic in Sierra Leone.

Journal of the Royal Society, Interface
Yang W, Zhang W, Kargbo D, Yang R, Chen Y, Chen Z, Kamara A, Kargbo B, Kandula S, Karspeck A, Liu C, Shaman J
2015-11-06

The Genomic Signature of Population Reconnection Following Isolation: From Theory to HIV.

G3 (Bethesda, Md.)
Alcala N, Jensen JD, Telenti A, Vuilleumier S
2015-11-06

Cost-effectiveness of new antiviral regimens for treatment-naïve U.S. veterans with hepatitis C.

Hepatology (Baltimore, Md.)
Chidi AP, Rogal S, Bryce CL, Fine MJ, Good CB, Myaskovsky L, Rustgi VK, Tsung A, Smith KJ
2015-11-03

Impact of bed capacity on spatiotemporal shifts in Ebola transmission.

Proceedings of the National Academy of Sciences of the United States of America
Townsend JP, Skrip LA, Galvani AP
2015-11-01

Direct and indirect effects of climate change on projected future fire regimes in the western United States.

The Science of the total environment
Liu Z, Wimberly MC
2015-11-01

Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis.

PLoS medicine
Bezemer D, Cori A, Ratmann O, van Sighem A, Hermanides HS, Dutilh BE, Gras L, Rodrigues Faria N, van den Hengel R, Duits AJ, Reiss P, de Wolf F, Fraser C,
2015-11-01

Improving Control of Antibiotic-Resistant Gonorrhea by Integrating Research Agendas Across Disciplines: Key Questions Arising From Mathematical Modeling.

The Journal of infectious diseases
Grad YH, Goldstein E, Lipsitch M, White PJ
2015-11-01

Economic Costs of Bacterial Meningitis: A Systematic Review

Value in Health
N. Alvis-Zakzuk, M. Carrasquilla-Sotomayor, N. Alvis-Guzmán, A. Paternina-Caicedo, J. Herrera-Arrieta, W. Coronel-Rodríguez, D.S. Castillo-Saavedra
2015-11-01

Erratum to: ‘The potential impact of coinfection on antimicrobial chemotherapy and drug resistance’.

Trends in microbiology
Birger RB, Kouyos RD, Cohen T, Griffiths EC, Huijben S, Mina MJ, Volkova V, Grenfell B, Metcalf CJE
2015-11-01

Transmission heterogeneity and autoinoculation in a multisite infection model of HPV.

Mathematical biosciences
Brouwer AF, Meza R, Eisenberg MC
2015-11-01

SimNest: Social Media Nested Epidemic Simulation via Online Semi-supervised Deep Learning.

Proceedings. IEEE International Conference on Data Mining
Zhao L, Chen J, Chen F, Wang W, Lu CT, Ramakrishnan N
2015-11-01

Recombination produces coherent bacterial species clusters in both core and accessory genomes.

Microbial genomics
Marttinen P, Croucher NJ, Gutmann MU, Corander J, Hanage WP
2015-11-01

Refugia and the evolutionary epidemiology of drug resistance.

Biology letters
Park AW, Haven J, Kaplan R, Gandon S
2015-11-01

The Dynamic Relationship Between Clinical Symptomatology and Viral Shedding in Naturally Acquired Seasonal and Pandemic Influenza Virus Infections.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Ip DKM, Lau LLH, Chan KH, Fang VJ, Leung GM, Peiris MJS, Cowling BJ
2015-11-01

Leptospirosis in Rio Grande do Sul, Brazil: An Ecosystem Approach in the Animal-Human Interface.

PLoS neglected tropical diseases
Schneider MC, Najera P, Pereira MM, Machado G, dos Anjos CB, Rodrigues RO, Cavagni GM, Muñoz-Zanzi C, Corbellini LG, Leone M, Buss DF, Aldighieri S, Espinal MA
2015-11-01

Attractor-Based Obstructions to Growth in Homogeneous Cyclic Boolean Automata.

Journal of computer science and systems biology
Khan B, Cantor Y, Dombrowski K
2015-11-01

Public health impact of disease-behavior dynamics: Comment on “Coupled disease-behavior dynamics on complex networks: A review” by Z. Wang et al.

Physics of life reviews
Wells CR, Galvani AP
2015-10-31

Data for action: collection and use of local data to end tuberculosis.

Lancet (London, England)
Theron G, Jenkins HE, Cobelens F, Abubakar I, Khan AJ, Cohen T, Dowdy DW
2015-10-31

MIDAS