Papers

Estimating chlamydia prevalence: more difficult than modelling suggests – Authors’ reply.

The Lancet. Public health
White PJ, Lewis PJ
2018-09-01

The distribution of district-level leprosy incidence in India is geometric-stable, consistent with subcriticality.

Epidemics
Lietman TM, Worden L, Liu F, Porco TC
2018-09-01

Transmissibility of Norovirus in Urban Versus Rural Households in a Large Community Outbreak in China.

Epidemiology (Cambridge, Mass.)
Tsang TK, Chen TM, Longini IM Jr., Halloran ME, Wu Y, Yang Y
2018-09-01

Measles outbreak risk in Pakistan: exploring the potential of combining vaccination coverage and incidence data with novel data-streams to strengthen control.

Epidemiology and infection
Wesolowski A, Winter A, Tatem AJ, Qureshi T, Engø-Monsen K, Buckee CO, Cummings DAT, Metcalf CJE
2018-09-01

Transmission dynamics of influenza in two major cities of Uganda.

Epidemics
Yang W, Cummings MJ, Bakamutumaho B, Kayiwa J, Owor N, Namagambo B, Byaruhanga T, Lutwama JJ, O’Donnell MR, Shaman J
2018-09-01

Estimating Weekly Call Volume to a National Nurse Telephone Triage Line in an Influenza Pandemic.

Health security
Adhikari BB, Koonin LM, Mugambi ML, Sliger KD, Washington ML, Kahn EB, Meltzer MI
2018-09-01

Optimal multi-source forecasting of seasonal influenza.

PLoS computational biology
Ertem Z, Raymond D, Meyers LA
2018-09-01

Extreme-Scale Dynamic Exploration of a Distributed Agent-Based Model With the EMEWS Framework.

IEEE Transactions on Computational Social Systems
Jonathan Ozik, Nicholson T. Collier, Justin M. Wozniak, Charles M. Macal, and Gary An
2018-08-30

Spatio-temporal spillover risk of yellow fever in Brazil.

Parasites & vectors
Kaul RB, Evans MV, Murdock CC, Drake JM
2018-08-29

Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases.

Molecular systems biology
Michlmayr D, Pak TR, Rahman AH, Amir ED, Kim EY, Kim-Schulze S, Suprun M, Stewart MG, Thomas GP, Balmaseda A, Wang L, Zhu J, Suaréz-Fariñas M, Wolinsky SM, Kasarskis A, Harris E
2018-08-27

Enterovirus outbreak dynamics.

Science (New York, N.Y.)
Nikolay B, Cauchemez S
2018-08-24

Genotyping and Whole-Genome Sequencing to Identify Tuberculosis Transmission to Pediatric Patients in British Columbia, Canada, 2005-2014.

The Journal of infectious diseases
Guthrie JL, Delli Pizzi A, Roth D, Kong C, Jorgensen D, Rodrigues M, Tang P, Cook VJ, Johnston J, Gardy JL
2018-08-24

Micro-Hotspots of Risk in Urban Cholera Epidemics.

The Journal of infectious diseases
Azman AS, Luquero FJ, Salje H, Mbaïbardoum NN, Adalbert N, Ali M, Bertuzzo E, Finger F, Toure B, Massing LA, Ramazani R, Saga B, Allan M, Olson D, Leglise J, Porten K, Lessler J
2018-08-24

Feedback Between Behavioral Adaptations and Disease Dynamics.

Scientific reports
Chen J, Marathe A, Marathe M
2018-08-20

Simultaneously characterizing the comparative economics of routine female adolescent nonavalent human papillomavirus (HPV) vaccination and assortativity of sexual mixing in Hong Kong Chinese: a modeling analysis.

BMC medicine
Choi HCW, Jit M, Leung GM, Tsui KL, Wu JT
2018-08-17

Assessing the Use of Influenza Forecasts and Epidemiological Modeling in Public Health Decision Making in the United States.

Scientific reports
Doms C, Kramer SC, Shaman J
2018-08-17

Exploring scenarios of chikungunya mitigation with a data-driven agent-based model of the 2014-2016 outbreak in Colombia.

Scientific reports
España G, Grefenstette J, Perkins A, Torres C, Campo Carey A, Diaz H, de la Hoz F, Burke DS, van Panhuis WG
2018-08-15

Modeling the 2016-2017 Yemen cholera outbreak with the impact of limited medical resources.

Journal of theoretical biology
He D, Wang X, Gao D, Wang J
2018-08-14

Use of Deep Learning to Examine the Association of the Built Environment With Prevalence of Neighborhood Adult Obesity.

JAMA network open
Maharana A, Nsoesie EO
2018-08-03

Investigating spillover of multidrug-resistant tuberculosis from a prison: a spatial and molecular epidemiological analysis.

BMC medicine
Warren JL, Grandjean L, Moore DAJ, Lithgow A, Coronel J, Sheen P, Zelner JL, Andrews JR, Cohen T
2018-08-03

MIDAS