Papers

A practical guide to measuring local adaptation.

Ecology letters
Blanquart F, Kaltz O, Nuismer SL, Gandon S
2013-07-16

An explosive epidemic of DENV-3 in Cairns, Australia.

PloS one
Ritchie SA, Pyke AT, Hall-Mendelin S, Day A, Mores CN, Christofferson RC, Gubler DJ, Bennett SN, van den Hurk AF
2013-07-16

Early warning signals of stochastic switching.

Proceedings. Biological sciences
Drake JM
2013-07-12

Inferring the causes of the three waves of the 1918 influenza pandemic in England and Wales.

Proceedings. Biological sciences
He D, Dushoff J, Day T, Ma J, Earn DJ
2013-07-12

Assessment of transmission in trachoma programs over time suggests no short-term loss of immunity.

PLoS neglected tropical diseases
Liu F, Porco TC, Ray KJ, Bailey RL, Mkocha H, Muñoz B, Quinn TC, Lietman TM, West SK
2013-07-11

Optimal design of studies of influenza transmission in households. II: comparison between cohort and case-ascertained studies.

Epidemiology and infection
Klick B, Nishiura H, Leung GM, Cowling BJ
2013-07-09

Household transmission of rotavirus in a community with rotavirus vaccination in Quininde, Ecuador.

PLoS One
Lopman B, Vicuña Y, Salazar F, Broncano N, Esona MD, Sandoval C, Gregoricus N, Bowen MD, Payne D, Vaca M, Chico M, Parashar U, Cooper PJ
2013-07-09

Time and dose-dependent risk of pneumococcal pneumonia following influenza: a model for within-host interaction between influenza and Streptococcus pneumoniae.

Journal of the Royal Society, Interface
Shrestha S, Foxman B, Dawid S, Aiello AE, Davis BM, Berus J, Rohani P
2013-07-05

Balancing evidence and uncertainty when considering rubella vaccine introduction.

PLoS One
Lessler J, Metcalf CJ
2013-07-05

Influenza A (H7N9) and the importance of digital epidemiology.

The New England journal of medicine
Salathé M, Freifeld CC, Mekaru SR, Tomasulo AF, Brownstein JS
2013-07-05

Interactions between serotypes of dengue highlight epidemiological impact of cross-immunity.

Journal of the Royal Society, Interface
Reich NG, Shrestha S, King AA, Rohani P, Lessler J, Kalayanarooj S, Yoon IK, Gibbons RV, Burke DS, Cummings DA
2013-07-05

A reexamination of connectivity trends via exponential random graph modeling in two IDU risk networks.

Substance use & misuse
Dombrowski K, Khan B, McLean K, Curtis R, Wendel T, Misshula E, Friedman S
2013-07-04

Optimal isolation control strategies and cost-effectiveness analysis of a two-strain avian influenza model.

Bio Systems
Agusto FB
2013-07-03

Clinical and immunological aspects of post-kala-azar dermal leishmaniasis in Bangladesh.

The American journal of tropical medicine and hygiene
Islam S, Kenah E, Bhuiyan MA, Rahman KM, Goodhew B, Ghalib CM, Zahid MM, Ozaki M, Rahman MW, Haque R, Luby SP, Maguire JH, Martin D, Bern C
2013-07-03

Twitter as a sentinel in emergency situations: lessons from the Boston marathon explosions.

PLoS currents
Cassa CA, Chunara R, Mandl K, Brownstein JS
2013-07-02

Characterization of the upper respiratory tract microbiomes of patients with pandemic H1N1 influenza.

PloS one
Chaban B, Albert A, Links MG, Gardy J, Tang P, Hill JE
2013-07-02

Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti.

mBio
Katz LS, Petkau A, Beaulaurier J, Tyler S, Antonova ES, Turnsek MA, Guo Y, Wang S, Paxinos EE, Orata F, Gladney LM, Stroika S, Folster JP, Rowe L, Freeman MM, Knox N, Frace M, Boncy J, Graham M, Hammer BK, Boucher Y, Bashir A, Hanage WP, Van Domselaar G, Tarr CL
2013-07-02

MIDAS