Papers

Modeling inoculum dose dependent patterns of acute virus infections.

Journal of theoretical biology
Li Y, Handel A
2014-01-21

Developmental models for estimating ecological responses to environmental variability: structural, parametric, and experimental issues.

Acta biotheoretica
Moore JL, Remais JV
2014-01-21

Enhancing hepatitis C treatment in the custodial setting: a national roadmap.

The Medical journal of Australia
Mina MM, Clark PJ, Beasley HM, Herawati L, Butler TG, Lloyd AR
2014-01-20

Nuanced risk assessment for emerging infectious diseases.

Lancet (London, England)
Fisman DN, Leung GM, Lipsitch M
2014-01-18

The US 2009 A(H1N1) influenza epidemic: quantifying the impact of school openings on the reproductive number.

Epidemiology (Cambridge, Mass.)
Huang KE, Lipsitch M, Shaman J, Goldstein E
2014-01-18

Characteristics of LGV repeaters: analysis of LGV surveillance data.

Sexually transmitted infections
Rönn M, Hughes G, White P, Simms I, Ison C, Ward H
2014-01-17

How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example.

Journal of the Royal Society, Interface
Handel A, Akin V, Pilyugin SS, Zarnitsyna V, Antia R
2014-01-17

Phylogenetic characterization of Escherichia coli O157 : H7 based on IS629 distribution and Shiga toxin genotype.

Microbiology (Reading, England)
Stanton E, Park D, Döpfer D, Ivanek R, Kaspar CW
2014-01-16

Reconstructing complex regions of genomes using long-read sequencing technology.

Genome research
Huddleston J, Ranade S, Malig M, Antonacci F, Chaisson M, Hon L, Sudmant PH, Graves TA, Alkan C, Dennis MY, Wilson RK, Turner SW, Korlach J, Eichler EE
2014-01-15

Serological responses following influenza A(H7N9) virus infection.

The Journal of infectious diseases
Freeman G, Cowling BJ
2014-01-15

Re: “Mendelian randomization and estimation of treatment efficacy for chronic diseases”. The authors reply.

American journal of epidemiology
Schooling CM, Freeman G, Cowling BJ
2014-01-15

HPTN 071 (PopART): a cluster-randomized trial of the population impact of an HIV combination prevention intervention including universal testing and treatment: mathematical model.

PLoS One
Cori A, Ayles H, Beyers N, Schaap A, Floyd S, Sabapathy K, Eaton JW, Hauck K, Smith P, Griffith S, Moore A, Donnell D, Vermund SH, Fidler S, Hayes R, Fraser C,
2014-01-15

Female red colobus monkeys maintain their densities through flexible feeding strategies in logged forests in Kibale National Park, Uganda.

American journal of physical anthropology
Milich KM, Stumpf RM, Chambers JM, Chapman CA
2014-01-15

A Dirichlet process model for classifying and forecasting epidemic curves.

BMC infectious diseases
Nsoesie EO, Leman SC, Marathe MV
2014-01-09

A bayesian MCMC approach to assess the complete distribution of fitness effects of new mutations: uncovering the potential for adaptive walks in challenging environments.

Genetics
Bank C, Hietpas RT, Wong A, Bolon DN, Jensen JD
2014-01-09

Predicting the impact of vaccination on the transmission dynamics of typhoid in South Asia: a mathematical modeling study.

PLoS neglected tropical diseases
Pitzer VE, Bowles CC, Baker S, Kang G, Balaji V, Farrar JJ, Grenfell BT
2014-01-09

Comparison of severity-of-illness scores in critically ill obstetric patients: a 6-year retrospective cohort.

Critical care medicine
Rojas-Suarez J, Paternina-Caicedo AJ, Miranda J, Mendoza R, Dueñas-Castel C, Bourjeily G
2014-01-08

Freezing period strongly impacts the emergence of a global consensus in the voter model

Scientific reports
Wang Z, Liu Y, Wang L, Zhang Y, Wang Z
2014-01-08

The majority of CD4+ T-cell depletion during acute simian-human immunodeficiency virus SHIV89.6P infection occurs in uninfected cells.

Journal of virology
Matrajt L, Younan PM, Kiem HP, Schiffer JT
2014-01-07

Comparison of metatranscriptomic samples based on k-tuple frequencies.

PLoS One
Wang Y, Liu L, Chen L, Chen T, Sun F
2014-01-02

MIDAS