Papers

Determinants of Short-term Movement in a Developing Region and Implications for Disease Transmission.

Epidemiology (Cambridge, Mass.)
Kraay ANM, Trostle J, Brouwer AF, Cevallos W, Eisenberg JNS
2018-01-01

Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver.

Virus evolution
Wymant C, Blanquart F, Golubchik T, Gall A, Bakker M, Bezemer D, Croucher NJ, Hall M, Hillebregt M, Ong SH, Ratmann O, Albert J, Bannert N, Fellay J, Fransen K, Gourlay A, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos R, Laeyendecker O, Liitsola K, Meyer L, Porter K, Ristola M, van Sighem A, Berkhout B, Cornelissen M, Kellam P, Reiss P, Fraser C,
2018-01-01

The cost-effectiveness of alternative vaccination strategies for polyvalent meningococcal vaccines in Burkina Faso: A transmission dynamic modeling study.

PLoS medicine
Yaesoubi R, Trotter C, Colijn C, Yaesoubi M, Colombini A, Resch S, Kristiansen PA, LaForce FM, Cohen T
2018-01-01

QSAR and Pharmacophore Mapping Studies on Benzothiazinimines to Relate their Structural Features with anti-HIV Activity.

Medicinal chemistry (Shariqah (United Arab Emirates))
Geethaavacini G, Poh GP, Yan LY, Deepashini R, Shalini S, Harish R, Sureshkumar K, Ravichandran V
2018-01-01

Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data.

Genome research
Huddleston J, Chaisson MJP, Steinberg KM, Warren W, Hoekzema K, Gordon D, Graves-Lindsay TA, Munson KM, Kronenberg ZN, Vives L, Peluso P, Boitano M, Chin CS, Korlach J, Wilson RK, Eichler EE
2018-01-01

Experimental evidence of a pathogen invasion threshold.

Royal Society open science
Dallas TA, Krkošek M, Drake JM
2018-01-01

Editorial: Allee effects in ecology and evolution.

The Journal of animal ecology
Kramer AM, Berec L, Drake JM
2018-01-01

ELISPOT-Based “Multi-Color FluoroSpot” to Study Type-Specific and Cross-Reactive Responses in Memory B Cells after Dengue and Zika Virus Infections.

Methods in molecular biology (Clifton, N.J.)
Andrade P, Coloma J, Harris E
2018-01-01

Influenza-associated mortality in Yancheng, China, 2011-15.

Influenza and other respiratory viruses
Zhang H, Xiong Q, Wu P, Chen Y, Leung NHL, Cowling BJ
2018-01-01

Infectious disease prediction with kernel conditional density estimation.

Statistics in medicine
Ray EL, Sakrejda K, Lauer SA, Johansson MA, Reich NG
2017-12-30

Simulations for designing and interpreting intervention trials in infectious diseases.

BMC medicine
Halloran ME, Auranen K, Baird S, Basta NE, Bellan SE, Brookmeyer R, Cooper BS, DeGruttola V, Hughes JP, Lessler J, Lofgren ET, Longini IM, Onnela JP, Özler B, Seage GR, Smith TA, Vespignani A, Vynnycky E, Lipsitch M
2017-12-29

Models and analyses to understand threats to polio eradication.

BMC medicine
Koopman JS
2017-12-22

Recurring infection with ecologically distinct HPV types can explain high prevalence and diversity.

Proceedings of the National Academy of Sciences of the United States of America
Ranjeva SL, Baskerville EB, Dukic V, Villa LL, Lazcano-Ponce E, Giuliano AR, Dwyer G, Cobey S
2017-12-19

Quantifying Zika: Advancing the Epidemiology of Zika With Quantitative Models.

The Journal of infectious diseases
Keegan LT, Lessler J, Johansson MA
2017-12-16

Spatial clustering of measles vaccination coverage among children in sub-Saharan Africa.

BMC Public Health
Brownwright TK, Dodson ZM, van Panhuis WG
2017-12-15

Differential gene expression elicited by children in response to the 2015-16 live attenuated versus inactivated influenza vaccine.

Vaccine
Cole KS, Martin JM, Horne WT, Lin CJ, Nowalk MP, Alcorn JF, Zimmerman RK
2017-12-14

MIDAS