Papers

Modeling inpatient and outpatient antibiotic stewardship interventions to reduce the burden of Clostridioides difficile infection in a regional healthcare network.

PloS one
Rhea S, Jones K, Endres-Dighe S, Munoz B, Weber DJ, Hilscher R, MacFarquhar J, Sickbert-Bennett E, DiBiase L, Marx A, Rineer J, Lewis J, Bobashev G,
2020-06-11

Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Geneva, Switzerland (SEROCoV-POP): a population-based study.

Lancet
Stringhini S, Wisniak A, Piumatti G, Azman AS, Lauer SA, Baysson H, De Ridder D, Petrovic D, Schrempft S, Marcus K, Yerly S, Arm Vernez I, Keiser O, Hurst S, Posfay-Barbe KM, Trono D, Pittet D, Gétaz L, Chappuis F, Eckerle I, Vuilleumier N, Meyer B, Flahault A, Kaiser L, Guessous I
2020-06-11

Have deaths from COVID-19 in Europe plateaued due to herd immunity?

Lancet
Okell LC, Verity R, Watson OJ, Mishra S, Walker P, Whittaker C, Katzourakis A, Donnelly CA, Riley S, Ghani AC, Gandy A, Flaxman S, Ferguson NM, Bhatt S
2020-06-11

Ten recommendations for supporting open pathogen genomic analysis in public health.

Nature medicine
Black A, MacCannell DR, Sibley TR, Bedford T
2020-06-11

Dogs and pigs are transport hosts of Necator americanus: Molecular evidence for a zoonotic mechanism of human hookworm transmission in Ghana.

Zoonoses and public health
Boyko RH, Marie Harrison L, Humphries D, Galvani AP, Townsend JP, Otchere J, Wilson MD, Cappello M
2020-06-11

Interplay of global multi-scale human mobility, social distancing, government interventions, and COVID-19 dynamics.

medRxiv : the preprint server for health sciences
Adiga A, Wang L, Sadilek A, Tendulkar A, Venkatramanan S, Vullikanti A, Aggarwal G, Talekar A, Ben X, Chen J, Lewis B, Swarup S, Tambe M, Marathe M
2020-06-11

The Optimization of Methods for the Collection of Aerosolized Murine Norovirus.

Food and environmental virology
Boles C, Brown G, Park JH, Nonnenmann M
2020-06-10

A six-plex droplet digital RT-PCR assay for seasonal influenza virus typing, subtyping, and lineage determination.

Influenza and other respiratory viruses
Leong NKC, Chu DKW, Chu JTS, Tam YH, Ip DKM, Cowling BJ, Poon LLM
2020-06-10

Who Should We Fear More: Biohackers, Disgruntled Postdocs, or Bad Governments? A Simple Risk Chain Model of Biorisk.

Health security
Sandberg A, Nelson C
2020-06-10

Estimating the contribution of different age strata to vaccine serotype pneumococcal transmission in the pre vaccine era: a modelling study.

BMC medicine
Flasche S, Lipsitch M, Ojal J, Pinsent A
2020-06-10

Diversity of avian influenza A(H5N6) viruses in wild birds in southern China.

The Journal of general virology
Zhang T, Fan K, Zhang X, Xu Y, Xu J, Xu B, Li R
2020-06-10

A Multivariate View of Parallel Evolution

Evolution; international journal of organic evolution
De Lisle SP, Bolnick DI
2020-06-10

Case Study: Using Facebook Data to Monitor Adherence to Stay-at-home Orders in Colorado and Utah

MedRxiv
Ryan M Layer, Bailey Fosdick, Daniel B Larremore, Michael Bradshaw, Paul Doherty
2020-06-09

Key Positions of HIV-1 Env and Signatures of Vaccine Efficacy Show Gradual Reduction of Population Founder Effects at the Clade and Regional Levels.

mBio
Han C, Johnson J, Dong R, Kandula R, Kort A, Wong M, Yang T, Breheny PJ, Brown GD, Haim H
2020-06-09

Geographic Variation in the Utilization of and Mortality After Emergency General Surgery Operations in the Northeastern and Southeastern United States.

Annals of surgery
Becher RD, Jin L, Warren JL, Gill TM, DeWane MP, Davis KA, Zhang Y
2020-06-09

Transition from Social Vulnerability to Resiliency vis-à-vis COVID-19

Statistics and Applications
S. Pyne, S. Ray, R. Gurewitsch and M. Aruru
2020-06-11

Critical Community Size for COVID-19: A Model Based Approach for Strategic Lockdown Policy

Statistics and Applications
Sarmistha Das, Pramit Ghosh, Bandana Sen, Saumyadipta Pyne and Indranil Mukhopadhyay
2020-06-08

MIDAS