Papers

Population Genomic- and Phylogenomic-Enabled Advances to Increase Insight Into Pathogen Biology and Epidemiology.

Phytopathology
Stam R, Gladieux P, Vinatzer BA, Goss EM, Potnis N, Candresse T, Brewer MT
2021-01-01

Implications of Shortened Quarantine Among Household Contacts of Index Patients with Confirmed SARS-CoV-2 Infection – Tennessee and Wisconsin, April-September 2020.

MMWR. Morbidity and mortality weekly report
Rolfes MA, Grijalva CG, Zhu Y, McLean HQ, Hanson KE, Belongia EA, Halasa NB, Kim A, Meece J, Reed C, Talbot HK, Fry AM
2021-01-01

Implementation and adherence of routine pertussis vaccination (DTP) in a low-resource urban birth cohort.

BMJ open
Gunning CE, Mwananyanda L, MacLeod WB, Mwale M, Thea DM, Pieciak RC, Rohani P, Gill CJ
2020-12-31

Influenza vaccine effectiveness against hospitalization in the United States, 2019-2020.

The Journal of infectious diseases
Tenforde MW, Talbot HK, Trabue CH, Gaglani M, McNeal TM, Monto AS, Martin ET, Zimmerman RK, Silveira F, Middleton DB, Olson SM, Garten Kondor RJ, Barnes JR, Ferdinands JM, Patel MM,
2020-12-30

SARS-CoV-2 Testing in Florida, Illinois, and Maryland: Access and Barriers.

medRxiv : the preprint server for health sciences
Clipman SJ, Wesolowski A, Mehta SH, Agarwal S, Cobey SE, Cummings DAT, Gibson DG, Labrique AB, Kirk GD, Solomon SS
2020-12-24

REAL-TIME MECHANISTIC BAYESIAN FORECASTS OF COVID-19 MORTALITY.

medRxiv : the preprint server for health sciences
Gibson GC, Reich NG, Sheldon D
2020-12-24

Cohorting to isolate asymptomatic spreaders: An agent-based simulation study on the Mumbai Suburban Railway.

ArXiv
Talekar A, Shriram S, Vaidhiyan N, Aggarwal G, Chen J, Venkatramanan S, Wang L, Adiga A, Sadilek A, Tendulkar A, Marathe M, Sundaresan R, Tambe M
2020-12-23

Pneumonia following symptomatic influenza infection among Nicaraguan children before and after introduction of the pneumococcal conjugate vaccine.

The Journal of infectious diseases
Kubale J, Balmaseda A, Sanchez N, Lopez R, Gresh L, Ojeda S, Harris E, Kuan G, Zelner J, Gordon A
2020-12-22

Influenza Virus: Tracking, Predicting, and Forecasting.

Annual review of public health
Ali ST, Cowling BJ
2020-12-21

Anosmia and other SARS-CoV-2 positive test-associated symptoms, across three national, digital surveillance platforms as the COVID-19 pandemic and response unfolded: an observation study.

medRxiv : the preprint server for health sciences
Sudre CH, Keshet A, Graham MS, Joshi AD, Shilo S, Rossman H, Murray B, Molteni E, Klaser K, Canas LS, Antonelli M, Modat M, Capdevila Pujol J, Ganesh S, Wolf J, Meir T, Chan AT, Steves C, Spector T, Brownstein JS, Segal E, Ourselin S, Astley C
2020-12-16

Improving Detection of Disease Re-emergence Using a Web-Based Tool (RED Alert): Design and Case Analysis Study.

JMIR public health and surveillance
Parikh N, Daughton AR, Rosenberger WE, Aberle DJ, Chitanvis ME, Altherr FM, Velappan N, Fairchild G, Deshpande A
2020-12-15

Using Mobility Data to Understand and Forecast COVID19 Dynamics.

medRxiv : the preprint server for health sciences
Wang L, Ben X, Adiga A, Sadilek A, Tendulkar A, Venkatramanan S, Vullikanti A, Aggarwal G, Talekar A, Chen J, Lewis BL, Swarup S, Kapoor A, Tambe M, Marathe M
2020-12-15

Socio-economic disparities in social distancing during the COVID-19 pandemic in the United States : an observational study.

Journal of medical Internet research
Garnier R, Benetka JR, Kraemer J, Bansal S
2020-12-14

Network structure and rapid HIV transmission among people who inject drugs: A simulation-based analysis.

Epidemics
Singleton AL, Marshall BDL, Bessey S, Harrison MT, Galvani AP, Yedinak JL, Jacka BP, Goodreau SM, Goedel WC
2020-12-14

Measuring Multiple Dimensions and Indices of Non-Vaccination Clustering in Michigan: 2008-2018.

American journal of epidemiology
Masters NB, Delamater PL, Boulton ML, Zelner J
2020-12-11

Routine asymptomatic testing strategies for airline travel during the COVID-19 pandemic: a simulation analysis.

medRxiv : the preprint server for health sciences
Kiang MV, Chin ET, Huynh BQ, Chapman LAC, Rodríguez-Barraquer I, Greenhouse B, Rutherford GW, Bibbins-Domingo K, Havlir D, Basu S, Lo NC
2020-12-11

Early detection of COVID-19 in China and the USA: summary of the implementation of a digital decision-support and disease surveillance tool.

BMJ open
Hswen Y, Brownstein JS, Xu X, Yom-Tov E
2020-12-10

MIDAS