Papers

Novel methods for the analysis of stepped wedge cluster randomized trials.

Statistics in medicine
Kennedy-Shaffer L, de Gruttola V, Lipsitch M
2019-12-26

Variation of growth characteristics of pneumococcus with environmental conditions.

BMC microbiology
Tóthpál A, Desobry K, Joshi SS, Wyllie AL, Weinberger DM
2019-12-26

Correlates of non-random patterns of serotype switching in pneumococcus.

The Journal of infectious diseases
Joshi SS, Al-Mamun MA, Weinberger DM
2019-12-25

Burden of influenza-associated outpatient influenza-like illness consultations in China, 2006-2015: A population-based study.

Influenza and other respiratory viruses
Feng L, Feng S, Chen T, Yang J, Lau YC, Peng Z, Li L, Wang X, Wong JYT, Qin Y, Bond HS, Zhang J, Fang VJ, Zheng J, Yang J, Wu P, Jiang H, He Y, Cowling BJ, Yu H, Shu Y, Lau EHY
2019-12-23

Age-dependent manifestations and case definitions of paediatric Zika: a prospective cohort study.

The Lancet. Infectious diseases
Burger-Calderon R, Bustos Carrillo F, Gresh L, Ojeda S, Sanchez N, Plazaola M, Katzelnick L, Mercado BL, Monterrey JC, Elizondo D, Arguello S, Nuñez A, Gordon A, Balmaseda A, Kuan G, Harris E
2019-12-20

Impacts of Zika emergence in Latin America on endemic dengue transmission.

Nature communications
Borchering RK, Huang AT, Mier-Y-Teran-Romero L, Rojas DP, Rodriguez-Barraquer I, Katzelnick LC, Martinez SD, King GD, Cinkovich SC, Lessler J, Cummings DAT
2019-12-16

Genomic mosaicism underlies the adaptation of marine Synechococcus ecotypes to distinct oceanic iron niches.

Environmental microbiology
Ahlgren NA, Belisle BS, Lee MD
2019-12-15

The First Report of Differences in Gut Microbiota Composition between Obese and Normal Weight Iranian Subjects

Iranian biomedical journal
Ettehad Marvasti F, Moshiri A, Taghavi MS, Riazi S, Taati M, Sadati SF, Ghaheri A, Masoomi M, Vaziri F, Fateh A, Rohani, Tarashi S, Masotti A, Ahmadi Badi S, Siadat SD
2019-12-14

Correction: Uncertainty analysis of species distribution models.

PloS one
Chen X, Castro LA, Dimitrov NB, Meyers LA
2019-12-12

The basic reproductive number for disease systems with multiple coupled heterogeneities.

Mathematical biosciences
Lloyd AL, Kitron U, Perkins TA, Vazquez-Prokopec GM, Waller LA
2019-12-11

Applying infectious disease forecasting to public health: a path forward using influenza forecasting examples.

BMC public health
Lutz CS, Huynh MP, Schroeder M, Anyatonwu S, Dahlgren FS, Danyluk G, Fernandez D, Greene SK, Kipshidze N, Liu L, Mgbere O, McHugh LA, Myers JF, Siniscalchi A, Sullivan AD, West N, Johansson MA, Biggerstaff M
2019-12-10

Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model.

PLoS computational biology
Mittler JE, Murphy JT, Stansfield SE, Peebles K, Gottlieb GS, Abernethy NF, Reid MC, Goodreau SM, Herbeck JT
2019-12-01

The projected impact of geographic targeting of oral cholera vaccination in sub-Saharan Africa: A modeling study.

PLoS medicine
Lee EC, Azman AS, Kaminsky J, Moore SM, McKay HS, Lessler J
2019-12-01

Hydroclimatic drivers of highly seasonal leptospirosis incidence suggest prominent soil reservoir of pathogenic Leptospira spp. in rural western China.

PLoS neglected tropical diseases
Cucchi K, Liu R, Collender PA, Cheng Q, Li C, Hoover CM, Chang HH, Liang S, Yang C, Remais JV
2019-12-01

External disturbances impact helminth-host interactions by affecting dynamics of infection, parasite traits, and host immune responses.

Ecology and evolution
Cattadori IM, Pathak AK, Ferrari MJ
2019-12-01

Comparing vector and human surveillance strategies to detect arbovirus transmission: A simulation study for Zika virus detection in Puerto Rico.

PLoS neglected tropical diseases
Madewell ZJ, Hemme RR, Adams L, Barrera R, Waterman SH, Johansson MA
2019-12-01

Global mortality associated with seasonal influenza epidemics: New burden estimates and predictors from the GLaMOR Project.

Journal of global health
Paget J, Spreeuwenberg P, Charu V, Taylor RJ, Iuliano AD, Bresee J, Simonsen L, Viboud C,
2019-12-01

MIDAS