Papers

Building the Framework for Standardized Clinical Laboratory Reporting of Next-generation Sequencing Data for Resistance-associated Mutations in Mycobacterium tuberculosis Complex.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
Tornheim JA, Starks AM, Rodwell TC, Gardy JL, Walker TM, Cirillo DM, Jayashankar L, Miotto P, Zignol M, Schito M
2019-10-15

Distinguishing Causation from Correlation in the Use of Correlates of Protection to Evaluate and Develop Influenza Vaccines.

American journal of epidemiology
Lim WW, Leung NHL, Sullivan SG, Tchetgen Tchetgen EJ, Cowling BJ
2019-10-10

The use of test-negative controls to monitor vaccine effectiveness: a systematic review of methodology.

Epidemiology (Cambridge, Mass.)
Chua H, Feng S, Lewnard JA, Sullivan SG, Blyth CC, Lipsitch M, Cowling BJ
2019-10-10

Effectiveness of Partial and Full Influenza Vaccination Among Children Aged <9 Years in Hong Kong, 2011-2019.

The Journal of infectious diseases
Chua H, Chiu SS, Chan ELY, Feng S, Kwan MYW, Wong JSC, Peiris JSM, Cowling BJ
2019-10-08

Improved characterisation of MRSA transmission using within-host bacterial sequence diversity.

eLife
Hall MD, Holden MT, Srisomang P, Mahavanakul W, Wuthiekanun V, Limmathurotsakul D, Fountain K, Parkhill J, Nickerson EK, Peacock SJ, Fraser C
2019-10-08

Regulating impact on bystanders in clinical trials: An unsettled frontier.

Clinical trials (London, England)
Eyal N, Kimmelman J, Holtzman LG, Lipsitch M
2019-10-01

Linking Decision Theory and Quantitative Microbial Risk Assessment: Tradeoffs Between Compliance and Efficacy for Waterborne Disease Interventions.

Risk analysis : an official publication of the Society for Risk Analysis
Hayashi MAL, Eisenberg MC, Eisenberg JNS
2019-10-01

Rapid Forecasting of Cholera Risk in Mozambique: Translational Challenges and Opportunities.

Prehospital and disaster medicine
Kahn R, Mahmud AS, Schroeder A, Aguilar Ramirez LH, Crowley J, Chan J, Buckee CO
2019-10-01

Detecting reports of unsafe foods in consumer product reviews.

JAMIA open
Maharana A, Cai K, Hellerstein J, Hswen Y, Munsell M, Staneva V, Verma M, Vint C, Wijaya D, Nsoesie EO
2019-10-01

Risk factors for positive depression screening across a shipboard deployment cycle.

BJPsych open
Arcury-Quandt AE, Harbertson J, Ziajko L, Hale BR
2019-09-20

Estimation and prediction for a mechanistic model of measles transmission using particle filtering and maximum likelihood estimation.

Statistics in Medicine
Eilertson KE, Fricks J, Ferrari MJ
2019-09-20

Letter to editor in response to Has Chlamydia trachomatis prevalence in young women in England, Scotland and Wales changed? Evidence from national probability surveys.

Epidemiology and infection
White PJ, Lewis J
2019-09-20

Interaction With Nontypeable Haemophilus influenzae Alters Progression of Streptococcus pneumoniae From Colonization to Disease in a Site-Specific Manner.

The Journal of infectious diseases
Lewnard JA, Givon-Lavi N, Dagan R
2019-09-13

Potential for Erosion of Efficacy in Noninferiority Trials of Decreasing Duration of Antibiotic Therapy.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
MacFadden DR, Hanage WP
2019-09-13

Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study.

Journal of medical Internet research
Abuelezam NN, Reshef YA, Novak D, Grad YH, Seage Iii GR, Mayer K, Lipsitch M
2019-09-12

MIDAS