Papers

The US 2009 A(H1N1) influenza epidemic: quantifying the impact of school openings on the reproductive number.

Epidemiology (Cambridge, Mass.)
Huang KE, Lipsitch M, Shaman J, Goldstein E
2014-03-01

Developmental models for estimating ecological responses to environmental variability: structural, parametric, and experimental issues.

Acta biotheoretica
Moore JL, Remais JV
2014-03-01

Genomic epidemiology of Neisseria gonorrhoeae with reduced susceptibility to cefixime in the USA: a retrospective observational study.

The Lancet. Infectious diseases
Grad YH, Kirkcaldy RD, Trees D, Dordel J, Harris SR, Goldstein E, Weinstock H, Parkhill J, Hanage WP, Bentley S, Lipsitch M
2014-03-01

Effect of dengue-2 virus infection on protein expression in the salivary glands of Aedes aegypti mosquitoes.

The American journal of tropical medicine and hygiene
Chisenhall DM, Londono BL, Christofferson RC, McCracken MK, Mores CN
2014-03-01

The 1918 influenza pandemic in New York City: age-specific timing, mortality, and transmission dynamics.

Influenza and other respiratory viruses
Yang W, Petkova E, Shaman J
2014-03-01

The Basics of CMMS.

Biomedical instrumentation & technology
Cohen T
2014-03-01

Increasing similarity in the dynamics of influenza in two adjacent subtropical Chinese cities following the relaxation of border restrictions.

The Journal of general virology
Tan Y, Lam TT, Wu C, Lee SS, Viboud C, Zhang R, Weinberger DM
2014-03-01

Length of intervals between epidemics: evaluating the influence of maternal transfer of immunity.

Ecology and evolution
Garnier R, Gandon S, Harding KC, Boulinier T
2014-03-01

Viral kinetics of primary dengue virus infection in non-human primates: a systematic review and individual pooled analysis.

Virology
Althouse BM, Durbin AP, Hanley KA, Halstead SB, Weaver SC, Cummings DA
2014-03-01

Within-host bacterial diversity hinders accurate reconstruction of transmission networks from genomic distance data.

PLoS computational biology
Worby CJ, Lipsitch M, Hanage WP
2014-03-01

The majority of CD4+ T-cell depletion during acute simian-human immunodeficiency virus SHIV89.6P infection occurs in uninfected cells.

Journal of virology
Matrajt L, Younan PM, Kiem HP, Schiffer JT
2014-03-01

Pneumococcal disease seasonality: incidence, severity and the role of influenza activity.

The European respiratory journal
Weinberger DM, Harboe ZB, Viboud C, Krause TG, Miller M, Mølbak K, Konradsen HB
2014-03-01

Neutrality, cross-immunity and subtype dominance in avian influenza viruses.

PLoS One
Brown VL, Drake JM, Barton HD, Stallknecht DE, Brown JD, Rohani P
2014-02-25

Epidemic risk from cholera introductions into Mexico.

PLoS currents
Moore SM, Shannon KL, Zelaya CE, Azman AS, Lessler J
2014-02-21

Epidemiological evidence for herd immunity induced by acellular pertussis vaccines.

Proceedings of the National Academy of Sciences of the United States of America
Domenech de Cellès M, Riolo MA, Magpantay FM, Rohani P, King AA
2014-02-18

Epidemiologic implications of asymptomatic reinfection: a mathematical modeling study of norovirus.

American journal of epidemiology
Lopman B, Simmons K, Gambhir M, Vinjé J, Parashar U
2014-02-15

Time varying networks and the weakness of strong ties.

Scientific reports
Karsai M, Perra N, Vespignani A
2014-02-10

Country- and age-specific optimal allocation of dengue vaccines.

Journal of theoretical biology
Ndeffo Mbah ML, Durham DP, Medlock J, Galvani AP
2014-02-07

Effect of the one-child policy on influenza transmission in China: a stochastic transmission model.

PLoS One
Liu F, Enanoria WT, Ray KJ, Coffee MP, Gordon A, Aragón TJ, Yu G, Cowling BJ, Porco TC
2014-02-06

Integrating influenza antigenic dynamics with molecular evolution.

Elife
Bedford T, Suchard MA, Lemey P, Dudas G, Gregory V, Hay AJ, McCauley JW, Russell CA, Smith DJ, Rambaut A
2014-02-04

MIDAS