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Daniel Weinberger

Associate Professor

Education

Affiliations

Projects

Papers

Wyllie AL, Warren JL, Regev-Yochay G, Givon-Lavi N, Dagan R, Weinberger DM. (2020). Serotype patterns of pneumococcal disease in adults are correlated with carriage patterns in older children. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Andersen MA, Niemann CU, Rostgaard K, Dalby T, Sørrig R, Weinberger DM, Hjalgrim H, Harboe ZB. (2020). Differences and Temporal Changes in Risk of Invasive Pneumococcal Disease in Adults with Hematological Malignancies: Results from a Nationwide 16-Year Cohort Study. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

de Oliveira LH, Shioda K, Valenzuela MT, Janusz CB, Rearte A, Sbarra AN, Warren JL, Toscano CM, Weinberger DM,. (2020). Declines in pneumonia mortality following the introduction of pneumococcal conjugate vaccines in Latin American and Caribbean countries. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Pitzer VE, Chitwood M, Havumaki J, Menzies NA, Perniciaro S, Warren JL, Weinberger DM, Cohen T. (2020). The impact of changes in diagnostic testing practices on estimates of COVID-19 transmission in the United States. medRxiv : the preprint server for health sciences

Pokutnaya D, Molaei G, Weinberger DM, Vossbrinck CR, Diaz AJ. (2020). Prevalence of Infection and Co-Infection and Presence of Rickettsial Endosymbionts in Ixodes Scapularis (Acari: Ixodidae) in Connecticut, USA. The Journal of parasitology, 106(1)

Jimbo Sotomayor R, Toscano CM, Sánchez Choez X, Vilema Ortíz M, Rivas Condo J, Ghisays G, Haneuse S, Weinberger DM, McGee G, de Oliveira LH. (2020). Impact of pneumococcal conjugate vaccine on pneumonia hospitalization and mortality in children and elderly in Ecuador: Time series analyses. Vaccine

Weinberger DM, Warren JL. (2020). Estimating the power to detect a change caused by a vaccine from time series data. Gates open research, (4)

Peccia J, Zulli A, Brackney DE, Grubaugh ND, Kaplan EH, Casanovas-Massana A, Ko AI, Malik AA, Wang D, Wang M, Warren JL, Weinberger DM, Arnold W, Omer SB. (2020). Measurement of SARS-CoV-2 RNA in wastewater tracks community infection dynamics. Nature biotechnology

Weinberger DM, Cohen T, Crawford FW, Mostashari F, Olson D, Pitzer VE, Reich NG, Russi M, Simonsen L, Watkins A, Viboud C. (2020). Estimating the early death toll of COVID-19 in the United States. bioRxiv : the preprint server for biology

Perniciaro SR, Weinberger DM. (2020). Variations in state-level SARS-COV-2 testing recommendations in the United States, March-July 2020. medRxiv : the preprint server for health sciences

Phillips MT, Warren JL, Givon-Lavi N, Tothpal A, Regev-Yochay G, Dagan R, Weinberger DM. (2020). Evaluating post-vaccine expansion patterns of pneumococcal serotypes. Vaccine, 38(49)

Warren JL, Weinberger DM. (2020). Estimating serotype-specific efficacy of pneumococcal conjugate vaccines using hierarchical models. Epidemiology (Cambridge, Mass.)

Watkins AE, Fenichel EP, Weinberger DM, Vogels CBF, Brackney DE, Casanovas-Massana A, Campbell M, Fournier J, Bermejo S, Datta R, Dela Cruz CS, Farhadian SF, Iwasaki A, Ko AI, Grubaugh ND, Wyllie AL. (2020). Pooling saliva to increase SARS-CoV-2 testing capacity. medRxiv : the preprint server for health sciences

Arguedas A, Trzci?ski K, O'Brien KL, Ferreira DM, Wyllie AL, Weinberger D, Danon L, Pelton SI, Azzari C, Hammitt LL, Sá-Leão R, Brandileone MC, Saha S, Suaya J, Isturiz R, Jodar L, Gessner BD. (2020). Upper Respiratory Tract Colonization With Streptococcus pneumoniae in Adults. Expert review of vaccines

Woolf SH, Chapman DA, Sabo RT, Weinberger DM, Hill L. (2020). Excess Deaths From COVID-19 and Other Causes, March-April 2020. JAMA

Schuck-Paim C, Taylor RJ, Alonso WJ, Weinberger DM, Simonsen L. (2019). Effect of pneumococcal conjugate vaccine introduction on childhood pneumonia mortality in Brazil: a retrospective observational study. The Lancet. Global health, 7(2)

Tóthpál A, Desobry K, Joshi SS, Wyllie AL, Weinberger DM. (2019). Variation of growth characteristics of pneumococcus with environmental conditions. BMC microbiology, 19(1)

Joshi SS, Al-Mamun MA, Weinberger DM. (2019). Correlates of non-random patterns of serotype switching in pneumococcus. The Journal of infectious diseases

Cassell K, Gacek P, Rabatsky-Ehr T, Petit S, Cartter M, Weinberger DM. (2019). Estimating the True Burden of Legionnaires' Disease. American journal of epidemiology, 188(9)

Weinberger DM, Shapiro ED. (2019). Pneumococcal Vaccines for Adults: What's Next?. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Weinberger DM, Pitzer VE, Regev-Yochay G, Givon-Lavi N, Dagan R. (2019). Association Between the Decline in Pneumococcal Disease in Unimmunized Adults and Vaccine-Derived Protection Against Colonization in Toddlers and Preschool-Aged Children. American journal of epidemiology, 188(1)

Shioda K, Schuck-Paim C, Taylor RJ, Lustig R, Simonsen L, Warren JL, Weinberger DM. (2019). Challenges in Estimating the Impact of Vaccination with Sparse Data. Epidemiology (Cambridge, Mass.), 30(1)

Cassell K, Gacek P, Warren JL, Raymond PA, Cartter M, Weinberger DM. (2018). Reply to Rucinski et al. The Journal of infectious diseases, 218(4)

Weinberger DM, Warren JL, Dalby T, Shapiro ED, Valentiner-Branth P, Slotved HC, Harboe ZB. (2019). Differences in the Impact of Pneumococcal Serotype Replacement in Individuals With and Without Underlying Medical Conditions. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 69(1)

Weinberger DM, Shapiro ED. (2019). Prevention of Pneumococcal Infections in Adults Using Conjugate Vaccines: No Easy Answers. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 69(1)

Weinberger DM, Harboe ZB, Shapiro ED. (2017). Developing Better Pneumococcal Vaccines for Adults. JAMA internal medicine, 177(3)

Niccolai LM, Meek JI, Brackney M, Hadler JL, Sosa LE, Weinberger DM. (2017). Declines in Human Papillomavirus (HPV)-Associated High-Grade Cervical Lesions After Introduction of HPV Vaccines in Connecticut, United States, 2008-2015. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 65(6)

Metcalf CJE, Walter KS, Wesolowski A, Buckee CO, Shevliakova E, Tatem AJ, Boos WR, Weinberger DM, Pitzer VE. (2017). Identifying climate drivers of infectious disease dynamics: recent advances and challenges ahead. Proceedings. Biological sciences, 284(1860)

Lewnard JA, Givon-Lavi N, Weinberger DM, Lipsitch M, Dagan R. (2017). Pan-serotype Reduction in Progression of Streptococcus pneumoniae to Otitis Media After Rollout of Pneumococcal Conjugate Vaccines. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 65(11)

Warren JL, Shioda K, Kürüm E, Schuck-Paim C, Lustig R, Taylor RJ, Simonsen L, Weinberger DM. (2017). Impact of Pneumococcal Conjugate Vaccines on Pneumonia Hospitalizations in High- and Low-Income Subpopulations in Brazil. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 65(11)

Weinberger DM. (2017). Filling evidence gaps on the impact of pneumococcal vaccines. The Lancet. Infectious diseases, 17(9)

Cassell K, Gacek P, Warren JL, Raymond PA, Cartter M, Weinberger DM. (2018). Association Between Sporadic Legionellosis and River Systems in Connecticut. The Journal of infectious diseases, 217(2)

Bruhn CA, Hetterich S, Schuck-Paim C, Kürüm E, Taylor RJ, Lustig R, Shapiro ED, Warren JL, Simonsen L, Weinberger DM. (2017). Estimating the population-level impact of vaccines using synthetic controls. Proceedings of the National Academy of Sciences of the United States of America, 114(7)

Kürüm E, Warren JL, Schuck-Paim C, Lustig R, Lewnard JA, Fuentes R, Bruhn CAW, Taylor RJ, Simonsen L, Weinberger DM. (2017). Bayesian Model Averaging with Change Points to Assess the Impact of Vaccination and Public Health Interventions. Epidemiology (Cambridge, Mass.), 28(6)

Colombe S, Togami E, Gelaw F, Antillón M, Fuentes R, Weinberger DM. (2017). Trends and correlates of cystic echinococcosis in Chile: 2001-2012. PLoS neglected tropical diseases, 11(9)

Antillón M, Warren JL, Crawford FW, Weinberger DM, Kürüm E, Pak GD, Marks F, Pitzer VE. (2017). The burden of typhoid fever in low- and middle-income countries: A meta-regression approach. PLoS neglected tropical diseases, 11(2)

Warren JL, Pingali SC, Weinberger DM. (2017). Spatial Variability in the Persistence of Pneumococcal Conjugate Vaccine-targeted Pneumococcal Serotypes Among Adults. Epidemiology (Cambridge, Mass.), 28(1)

Lewnard JA, Huppert A, Givon-Lavi N, Pettigrew MM, Regev-Yochay G, Dagan R, Weinberger DM. (2016). Density, Serotype Diversity, and Fitness of Streptococcus pneumoniae in Upper Respiratory Tract Cocolonization With Nontypeable Haemophilus influenzae. The Journal of infectious diseases, 214(9)

Weinberger DM, Grant LR, Weatherholtz RC, Warren JL, O'Brien KL, Hammitt LL. (2016). Relating Pneumococcal Carriage Among Children to Disease Rates Among Adults Before and After the Introduction of Conjugate Vaccines. American journal of epidemiology, 183(11)

Noveroske DB, Warren JL, Pitzer VE, Weinberger DM. (2016). Local variations in the timing of RSV epidemics. BMC infectious diseases, 16(1)

Bruhn CA, Schuck-Paim C, Kürüm E, Taylor RJ, Simonsen L, Weinberger DM. (2017). Improving Assessments of Population-level Vaccine Impact. Epidemiology (Cambridge, Mass.), 28(2)

Schuck-Paim C, Taylor RJ, Simonsen L, Lustig R, Kürüm E, Bruhn CA, Weinberger DM. (2017). Challenges to estimating vaccine impact using hospitalization data. Vaccine, 35(1)

Pingali SC, Warren JL, Mead AM, Sharova N, Petit S, Weinberger DM. (2016). Association Between Local Pediatric Vaccination Rates and Patterns of Pneumococcal Disease in Adults. The Journal of infectious diseases, 213(4)

Lewnard JA, Givon-Lavi N, Huppert A, Pettigrew MM, Regev-Yochay G, Dagan R, Weinberger DM. (2016). Epidemiological Markers for Interactions Among Streptococcus pneumoniae, Haemophilus influenzae, and Staphylococcus aureus in Upper Respiratory Tract Carriage. The Journal of infectious diseases, 213(10)

Weinberger DM, Warren JL, Steiner CA, Charu V, Viboud C, Pitzer VE. (2015). Reduced-Dose Schedule of Prophylaxis Based on Local Data Provides Near-Optimal Protection Against Respiratory Syncytial Virus. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 61(4)

Trzciński K, Li Y, Weinberger DM, Thompson CM, Cordy D, Bessolo A, Malley R, Lipsitch M. (2015). Effect of Serotype on Pneumococcal Competition in a Mouse Colonization Model. MBio, 6(5)

Weinberger DM, Bruhn CA, Shapiro ED. (2015). Vaccine against Pneumococcal Pneumonia in Adults. The New England journal of medicine, 373(1)

Weinberger DM, Klugman KP, Steiner CA, Simonsen L, Viboud C. (2015). Association between respiratory syncytial virus activity and pneumococcal disease in infants: a time series analysis of US hospitalization data. PLoS medicine, 12(1)

Weinberger DM, Shapiro ED. (2014). Pneumococcal conjugate vaccines for adults: reasons for optimism and for caution. Human vaccines & immunotherapeutics, 10(5)

Lewnard JA, Jirmanus L, Júnior NN, Machado PR, Glesby MJ, Ko AI, Carvalho EM, Schriefer A, Weinberger DM. (2014). Forecasting temporal dynamics of cutaneous leishmaniasis in Northeast Brazil. PLoS neglected tropical diseases, 8(10)

Shrestha S, Foxman B, Weinberger DM, Steiner C, Viboud C, Rohani P. (2013). Identifying the interaction between influenza and pneumococcal pneumonia using incidence data. Science translational medicine, 5(191)

Weinberger DM, Harboe ZB, Viboud C, Krause TG, Miller M, Mølbak K, Konradsen HB. (2014). Pneumococcal disease seasonality: incidence, severity and the role of influenza activity. The European respiratory journal, 43(3)

Weinberger DM, Givon-Lavi N, Shemer-Avni Y, Bar-Ziv J, Alonso WJ, Greenberg D, Dagan R. (2013). Influence of pneumococcal vaccines and respiratory syncytial virus on alveolar pneumonia, Israel. Emerging infectious diseases, 19(7)

Weinberger DM, Bruden DT, Grant LR, Lipsitch M, O'Brien KL, Pelton SI, Sanders EA, Feikin DR. (2013). Using pneumococcal carriage data to monitor postvaccination changes in invasive disease. American journal of epidemiology, 178(9)

Tan Y, Lam TT, Wu C, Lee SS, Viboud C, Zhang R, Weinberger DM. (2014). Increasing similarity in the dynamics of influenza in two adjacent subtropical Chinese cities following the relaxation of border restrictions. The Journal of general virology, 95(Pt 3)

Weinberger DM, Grant LR, Steiner CA, Weatherholtz R, Santosham M, Viboud C, O'Brien KL. (2014). Seasonal drivers of pneumococcal disease incidence: impact of bacterial carriage and viral activity. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 58(2)

Li Y, Weinberger DM, Thompson CM, Trzcinski K, Lipsitch M. (2013). Surface charge of Streptococcus pneumoniae predicts serotype distribution. Infection and immunity, 81(12)

Weinberger DM, Harboe ZB, Viboud C, Krause TG, Miller M, Mølbak K, Konradsen HB. (2013). Serotype-specific effect of influenza on adult invasive pneumococcal pneumonia. The Journal of infectious diseases, 208(8)

Lipsitch M, Abdullahi O, DʼAmour A, Xie W, Weinberger DM, Tchetgen Tchetgen E, Scott JA. (2012). Estimating rates of carriage acquisition and clearance and competitive ability for pneumococcal serotypes in Kenya with a Markov transition model. Epidemiology (Cambridge, Mass.), 23(4)

Weinberger DM, Krause TG, Mølbak K, Cliff A, Briem H, Viboud C, Gottfredsson M. (2012). Influenza epidemics in Iceland over 9 decades: changes in timing and synchrony with the United States and Europe. American journal of epidemiology, 176(7)

Weinberger DM, Malley R, Lipsitch M. (2011). Serotype replacement in disease after pneumococcal vaccination. Lancet, 378(9807)

Weinberger DM, Simonsen L, Jordan R, Steiner C, Miller M, Viboud C. (2012). Impact of the 2009 influenza pandemic on pneumococcal pneumonia hospitalizations in the United States. The Journal of infectious diseases, 205(3)

Weinberger DM, Harboe ZB, Flasche S, Scott JA, Lipsitch M. (2011). Prediction of serotypes causing invasive pneumococcal disease in unvaccinated and vaccinated populations. Epidemiology (Cambridge, Mass.), 22(2)

Weinberger DM, Harboe ZB, Sanders EA, Ndiritu M, Klugman KP, Rückinger S, Dagan R, Adegbola R, Cutts F, Johnson HL, O'Brien KL, Scott JA, Lipsitch M. (2010). Association of serotype with risk of death due to pneumococcal pneumonia: a meta-analysis. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 51(6)

Weinberger DM, Trzcinski K, Lu YJ, Bogaert D, Brandes A, Galagan J, Anderson PW, Malley R, Lipsitch M. (2009). Pneumococcal capsular polysaccharide structure predicts serotype prevalence. PLoS pathogens, 5(6)

Weinberger DM, Dagan R, Givon-Lavi N, Regev-Yochay G, Malley R, Lipsitch M. (2008). Epidemiologic evidence for serotype-specific acquired immunity to pneumococcal carriage. The Journal of infectious diseases, 197(11)

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