Qiu Z, Espinoza B, Vasconcelos VV, Chen C, Constantino SM, Crabtree SA, Yang L, Vullikanti A, Chen J, Weibull J, Basu K, Dixit A, Levin SA, Marathe MV. (2022). Understanding the coevolution of mask wearing and epidemics: A network perspective. Proceedings of the National Academy of Sciences of the United States of America, 119(26)

Truelove S, Smith CP, Qin M, Mullany LC, Borchering RK, Lessler J, Shea K, Howerton E, Contamin L, Levander J, Kerr J, Hochheiser H, Kinsey M, Tallaksen K, Wilson S, Shin L, Rainwater-Lovett K, Lemairtre JC, Dent J, Kaminsky J, Lee EC, Perez-Saez J, Hill A, Karlen D, Chinazzi M, Davis JT, Mu K, Xiong X, Pastore Y Piontti A, Vespignani A, Srivastava A, Porebski P, Venkatramanan S, Adiga A, Lewis B, Klahn B, Outten J, Orr M, Harrison G, Hurt B, Chen J, Vullikanti A, Marathe M, Hoops S, Bhattacharya P, Machi D, Chen S, Paul R, Janies D, Thill JC, Galanti M, Yamana TK, Pei S, Shaman JL, Healy JM, Slayton RB, Biggerstaff M, Johansson MA, Runge MC, Viboud C. (2022). Projected resurgence of COVID-19 in the United States in July-December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination. eLife, (11)

Chen J, Vullikanti A, Santos J, Venkatramanan S, Hoops S, Mortveit H, Lewis B, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2021). Epidemiological and economic impact of COVID-19 in the US. Scientific reports, 11(1)

Venkatramanan S, Sadilek A, Fadikar A, Barrett CL, Biggerstaff M, Chen J, Dotiwalla X, Eastham P, Gipson B, Higdon D, Kucuktunc O, Lieber A, Lewis BL, Reynolds Z, Vullikanti AK, Wang L, Marathe M. (2021). Forecasting influenza activity using machine-learned mobility map. Nature communications, 12(1)

Chen J, Hoops S, Marathe A, Mortveit H, Lewis B, Venkatramanan S, Haddadan A, Bhattacharya P, Adiga A, Vullikanti A, Wilson M, Ehrlich G, Fenster M, Eubank S, Barrett C, Marathe M. (2021). Prioritizing allocation of COVID-19 vaccines based on social contacts increases vaccination effectiveness. medRxiv : the preprint server for health sciences

Chen J, Vullikanti A, Santos J, Venkatramanan S, Hoops S, Mortveit H, Lewis B, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Epidemiological and Economic Impact of COVID-19 in the US. medRxiv : the preprint server for health sciences

Chen J, Vullikanti A, Hoops S, Mortveit H, Lewis B, Venkatramanan S, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Medical costs of keeping the US economy open during COVID-19. Scientific reports, 10(1)

Adiga A, Venkatramanan S, Schlitt J, Peddireddy A, Dickerman A, Bura A, Warren A, Klahn BD, Mao C, Xie D, Machi D, Raymond E, Meng F, Barrow G, Mortveit H, Chen J, Walke J, Goldstein J, Wilson ML, Orr M, Porebski P, Telionis PA, Beckman R, Hoops S, Eubank S, Baek YY, Lewis B, Marathe M, Barrett C. (2020). Evaluating the impact of international airline suspensions on the early global spread of COVID-19. medRxiv : the preprint server for health sciences

Talekar A, Shriram S, Vaidhiyan N, Aggarwal G, Chen J, Venkatramanan S, Wang L, Adiga A, Sadilek A, Tendulkar A, Marathe M, Sundaresan R, Tambe M. (2020). Cohorting to isolate asymptomatic spreaders: An agent-based simulation study on the Mumbai Suburban Railway. ArXiv

Adiga A, Chen J, Marathe M, Mortveit H, Venkatramanan S, Vullikanti A. (2020). Data-driven modeling for different stages of pandemic response. ArXiv

Chen J, Vullikanti A, Hoops S, Mortveit H, Lewis B, Venkatramanan S, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Medical Costs of Keeping the US Economy Open During COVID-19. medRxiv : the preprint server for health sciences

Adiga A, Chen J, Marathe M, Mortveit H, Venkatramanan S, Vullikanti A. (2020). Data-Driven Modeling for Different Stages of Pandemic Response. Journal of the Indian Institute of Science

Wang L, Ben X, Adiga A, Sadilek A, Tendulkar A, Venkatramanan S, Vullikanti A, Aggarwal G, Talekar A, Chen J, Lewis BL, Swarup S, Kapoor A, Tambe M, Marathe M. (2020). Using Mobility Data to Understand and Forecast COVID19 Dynamics. medRxiv : the preprint server for health sciences

Adiga A, Wang L, Sadilek A, Tendulkar A, Venkatramanan S, Vullikanti A, Aggarwal G, Talekar A, Ben X, Chen J, Lewis B, Swarup S, Tambe M, Marathe M. (2020). Interplay of global multi-scale human mobility, social distancing, government interventions, and COVID-19 dynamics. medRxiv : the preprint server for health sciences

Sambaturu P, Bhattacharya P, Chen J, Lewis B, Marathe M, Venkatramanan S, Vullikanti A. (2020). An automated approach for finding spatiotemporal patterns in disease spread. JMIR public health and surveillance

Venkatramanan S, Chen J, Fadikar A, Gupta S, Higdon D, Lewis B, Marathe M, Mortveit H, Vullikanti A. (2019). Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints. PLoS computational biology, 15(9)

Wang L, Chen J, Marathe A. (2019). A Framework for Discovering Health Disparities among Cohorts in an Influenza Epidemic. World wide web, 22(6)

Chen J, Marathe A, Marathe M. (2018). Feedback Between Behavioral Adaptations and Disease Dynamics. Scientific reports, 8(1)

Tabataba FS, Chakraborty P, Ramakrishnan N, Venkatramanan S, Chen J, Lewis B, Marathe M. (2017). A framework for evaluating epidemic forecasts. BMC infectious diseases, 17(1)

Venkatramanan S, Lewis B, Chen J, Higdon D, Vullikanti A, Marathe M. (2018). Using data-driven agent-based models for forecasting emerging infectious diseases. Epidemics, (22)

Bhuiyan H, Khan M, Chen J, Marathe M. (2017). Parallel Algorithms for Switching Edges in Heterogeneous Graphs. Journal of parallel and distributed computing, (104)

Chen J, Chu S, Chungbaek Y, Khan M, Kuhlman C, Marathe A, Mortveit H, Vullikanti A, Xie D. (2016). Effect of modelling slum populations on influenza spread in Delhi. BMJ Open, 6(9)

Xia H, Nagaraj K, Chen J, Marathe MV. (2015). Synthesis of a high resolution social contact network for Delhi with application to pandemic planning. Artificial intelligence in medicine, 65(2)

Zhao L, Chen J, Chen F, Wang W, Lu CT, Ramakrishnan N. (2015). SimNest: Social Media Nested Epidemic Simulation via Online Semi-supervised Deep Learning. Proceedings. IEEE International Conference on Data Mining, (2015)

Deodhar S, Bisset K, Chen J, Barrett C, Wilson M, Marathe M. (2015). EpiCaster: An Integrated Web Application For Situation Assessment and Forecasting of Global Epidemics. ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine, (2015)

Bisset KR, Chen J, Deodhar S, Feng X, Ma Y, Marathe MV. (2014). Indemics: An Interactive High-Performance Computing Framework for Data Intensive Epidemic Modeling. ACM transactions on modeling and computer simulation : a publication of the Association for Computing Machinery, 24(1)

Deodhar S, Bisset KR, Chen J, Ma Y, Marathe MV. (2014). An Interactive, Web-based High Performance Modeling Environment for Computational Epidemiology. ACM transactions on management information systems, 5(2)

Marathe A, Chen J, Eubank S, Liao S, Ma Y. (2014). Impact of paid sick leave policy: a social planner's perspective. American journal of public health, 104(1)

Barrett C, Bisset K, Chandan S, Chen J, Chungbaek Y, Eubank S, Evrenosoğlu Y, Lewis B, Lum K, Marathe A, Marathe M, Mortveit H, Parikh N, Phadke A, Reed J, Rivers C, Saha S, Stretz P, Swarup S, Thorp J, Vullikanti A, Xie D. . Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference, (2013)

Marathe A, Lewis B, Barrett C, Chen J, Marathe M, Eubank S, Ma Y. (2011). Comparing effectiveness of top-down and bottom-up strategies in containing influenza. PLoS One, 6(9)

Marathe A, Lewis B, Chen J, Eubank S. (2011). Sensitivity of household transmission to household contact structure and size. PLoS One, 6(8)