Joshua Warren

Associate Professor





Gunasekera KS, Walters E, van der Zalm MM, Palmer M, Warren JL, Hesseling AC, Cohen T, Seddon JA. (2021). Development of a treatment-decision algorithm for HIV-uninfected children evaluated for pulmonary tuberculosis. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Wyllie AL, Warren JL, Regev-Yochay G, Givon-Lavi N, Dagan R, Weinberger DM. (2020). Serotype patterns of pneumococcal disease in adults are correlated with carriage patterns in older children. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Wang Q, Miao H, Warren JL, Ren M, Benmarhnia T, Knibbs LD, Zhang H, Zhao Q, Huang C. (2020). Association of maternal ozone exposure with term low birth weight and susceptible window identification. Environment international, (146)

Yim CK, Teng CC, Warren JL, Tsai JC, Chadha N. (2020). Microinvasive Glaucoma Surgical Training in United States Ophthalmology Residency Programs. Clinical ophthalmology (Auckland, N.Z.), (14)

de Oliveira LH, Shioda K, Valenzuela MT, Janusz CB, Rearte A, Sbarra AN, Warren JL, Toscano CM, Weinberger DM,. (2020). Declines in pneumonia mortality following the introduction of pneumococcal conjugate vaccines in Latin American and Caribbean countries. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Pitzer VE, Chitwood M, Havumaki J, Menzies NA, Perniciaro S, Warren JL, Weinberger DM, Cohen T. (2020). The impact of changes in diagnostic testing practices on estimates of COVID-19 transmission in the United States. medRxiv : the preprint server for health sciences

Shioda K, Toscano CM, Valenzuela MT, Huarcaya WV, Warren JL, Weinberger DM, de Oliveira LH. (2020). Impact of pneumococcal conjugate vaccine uptake on childhood pneumonia mortality across income levels in Brazil, Colombia, and Peru. Gates open research, (4)

Weinberger DM, Warren JL. (2020). Estimating the power to detect a change caused by a vaccine from time series data. Gates open research, (4)

Peccia J, Zulli A, Brackney DE, Grubaugh ND, Kaplan EH, Casanovas-Massana A, Ko AI, Malik AA, Wang D, Wang M, Warren JL, Weinberger DM, Arnold W, Omer SB. (2020). Measurement of SARS-CoV-2 RNA in wastewater tracks community infection dynamics. Nature biotechnology

Johnson NP, Warren JL, Elliott EG, Niccolai LM, Deziel NC. (2020). A Multiregion Analysis of Shale Drilling Activity and Rates of Sexually Transmitted Infections in the United States. Sexually transmitted diseases, 47(4)

Phillips MT, Warren JL, Givon-Lavi N, Tothpal A, Regev-Yochay G, Dagan R, Weinberger DM. (2020). Evaluating post-vaccine expansion patterns of pneumococcal serotypes. Vaccine, 38(49)

Becher RD, Jin L, Warren JL, Gill TM, DeWane MP, Davis KA, Zhang Y. (2020). Geographic Variation in the Utilization of and Mortality After Emergency General Surgery Operations in the Northeastern and Southeastern United States. Annals of surgery

Wang Y, Wang K, Han T, Zhang P, Chen X, Wu W, Feng Y, Yang H, Li M, Xie B, Guo P, Warren JL, Shi X, Wang S, Zhang Y. (2020). Exposure to multiple metals and prevalence for preeclampsia in Taiyuan, China. Environment international, (145)

Warren JL, Weinberger DM. (2020). Estimating serotype-specific efficacy of pneumococcal conjugate vaccines using hierarchical models. Epidemiology (Cambridge, Mass.)

Gunasekera KS, Zelner J, Becerra MC, Contreras C, Franke MF, Lecca L, Murray MB, Warren JL, Cohen T. (2020). Children as sentinels of tuberculosis transmission: disease mapping of programmatic data. BMC medicine, 18(1)

Ransome Y, Subramanian SV, Duncan DT, Vlahov D, Warren J. (2020). Multivariate spatiotemporal modeling of drug- and alcohol-poisoning deaths in New York City, 2009-2014. Spatial and spatio-temporal epidemiology, (32)

Warren JL, Luben TJ, Chang HH. (2020). A spatially varying distributed lag model with application to an air pollution and term low birth weight study. Journal of the Royal Statistical Society. Series C, Applied statistics, 69(3)

Berchuck SI, Mwanza JC, Tanna AP, Budenz DL, Warren JL. (2019). Improved Detection of Visual Field Progression Using a Spatiotemporal Boundary Detection Method. Scientific reports, 9(1)

Mehra R, Keene DE, Kershaw TS, Ickovics JR, Warren JL. (2019). Racial and ethnic disparities in adverse birth outcomes: Differences by racial residential segregation. SSM - population health, (8)

Anwar MY, Warren JL, Pitzer VE. (2019). Diarrhea Patterns and Climate: A Spatiotemporal Bayesian Hierarchical Analysis of Diarrheal Disease in Afghanistan. The American journal of tropical medicine and hygiene, 101(3)

Warren JL, Kong W, Luben TJ, Chang HH. (2019). Critical window variable selection: estimating the impact of air pollution on very preterm birth. Biostatistics (Oxford, England)

Strickland MJ, Lin Y, Darrow LA, Warren JL, Mulholland JA, Chang HH. (2019). Associations Between Ambient Air Pollutant Concentrations and Birth Weight: A Quantile Regression Analysis. Epidemiology (Cambridge, Mass.), 30(5)

Berchuck SI, Mwanza JC, Warren JL. (2019). A spatially varying change points model for monitoring glaucoma progression using visual field data. Spatial statistics, (30)

Yang C, Lu L, Warren JL, Wu J, Jiang Q, Zuo T, Gan M, Liu M, Liu Q, DeRiemer K, Hong J, Shen X, Colijn C, Guo X, Gao Q, Cohen T. (2018). Internal migration and transmission dynamics of tuberculosis in Shanghai, China: an epidemiological, spatial, genomic analysis. The Lancet. Infectious diseases, 18(7)

Shioda K, Schuck-Paim C, Taylor RJ, Lustig R, Simonsen L, Warren JL, Weinberger DM. (2019). Challenges in Estimating the Impact of Vaccination with Sparse Data. Epidemiology (Cambridge, Mass.), 30(1)

Cassell K, Gacek P, Warren JL, Raymond PA, Cartter M, Weinberger DM. (2018). Reply to Rucinski et al. The Journal of infectious diseases, 218(4)

Weinberger DM, Warren JL, Dalby T, Shapiro ED, Valentiner-Branth P, Slotved HC, Harboe ZB. (2019). Differences in the Impact of Pneumococcal Serotype Replacement in Individuals With and Without Underlying Medical Conditions. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 69(1)

Warren JL, Grandjean L, Moore DAJ, Lithgow A, Coronel J, Sheen P, Zelner JL, Andrews JR, Cohen T. (2018). Investigating spillover of multidrug-resistant tuberculosis from a prison: a spatial and molecular epidemiological analysis. BMC medicine, 16(1)

Gonsalves GS, Copple JT, Johnson T, Paltiel AD, Warren JL. (2018). Bayesian adaptive algorithms for locating HIV mobile testing services. BMC medicine, 16(1)

Warren JL, Gordon-Larsen P. (2018). Factors associated with supermarket and convenience store closure: a discrete time spatial survival modelling approach. Journal of the Royal Statistical Society. Series A, (Statistics in Society), 181(3)

Warren JL, Son JY, Pereira G, Leaderer BP, Bell ML. (2018). Investigating the Impact of Maternal Residential Mobility on Identifying Critical Windows of Susceptibility to Ambient Air Pollution During Pregnancy. American journal of epidemiology, 187(5)

Sun J, Herazo-Maya JD, Kaminski N, Zhao H, Warren JL. (2017). A Dirichlet process mixture model for clustering longitudinal gene expression data. Statistics in medicine, 36(22)

Warren JL, Shioda K, Kürüm E, Schuck-Paim C, Lustig R, Taylor RJ, Simonsen L, Weinberger DM. (2017). Impact of Pneumococcal Conjugate Vaccines on Pneumonia Hospitalizations in High- and Low-Income Subpopulations in Brazil. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 65(11)

Cassell K, Gacek P, Warren JL, Raymond PA, Cartter M, Weinberger DM. (2018). Association Between Sporadic Legionellosis and River Systems in Connecticut. The Journal of infectious diseases, 217(2)

Bruhn CA, Hetterich S, Schuck-Paim C, Kürüm E, Taylor RJ, Lustig R, Shapiro ED, Warren JL, Simonsen L, Weinberger DM. (2017). Estimating the population-level impact of vaccines using synthetic controls. Proceedings of the National Academy of Sciences of the United States of America, 114(7)

Kürüm E, Warren JL, Schuck-Paim C, Lustig R, Lewnard JA, Fuentes R, Bruhn CAW, Taylor RJ, Simonsen L, Weinberger DM. (2017). Bayesian Model Averaging with Change Points to Assess the Impact of Vaccination and Public Health Interventions. Epidemiology (Cambridge, Mass.), 28(6)

Antillón M, Warren JL, Crawford FW, Weinberger DM, Kürüm E, Pak GD, Marks F, Pitzer VE. (2017). The burden of typhoid fever in low- and middle-income countries: A meta-regression approach. PLoS neglected tropical diseases, 11(2)

Warren JL, Pingali SC, Weinberger DM. (2017). Spatial Variability in the Persistence of Pneumococcal Conjugate Vaccine-targeted Pneumococcal Serotypes Among Adults. Epidemiology (Cambridge, Mass.), 28(1)

Weinberger DM, Grant LR, Weatherholtz RC, Warren JL, O'Brien KL, Hammitt LL. (2016). Relating Pneumococcal Carriage Among Children to Disease Rates Among Adults Before and After the Introduction of Conjugate Vaccines. American journal of epidemiology, 183(11)

Noveroske DB, Warren JL, Pitzer VE, Weinberger DM. (2016). Local variations in the timing of RSV epidemics. BMC infectious diseases, 16(1)

Warren JL, Stingone JA, Herring AH, Luben TJ, Fuentes M, Aylsworth AS, Langlois PH, Botto LD, Correa A, Olshan AF, . (2016). Bayesian multinomial probit modeling of daily windows of susceptibility for maternal PM2.5 exposure and congenital heart defects. Statistics in medicine, 35(16)

Warren JL, Perez-Heydrich C, Burgert CR, Emch ME. (2016). Influence of Demographic and Health Survey Point Displacements on Point-in-Polygon Analyses. Spatial demography, 4(2)

Warren JL, Perez-Heydrich C, Burgert CR, Emch ME. (2016). Influence of Demographic and Health Survey Point Displacements on Distance-Based Analyses. Spatial demography, 4(2)

Warren JL, Mwanza JC, Tanna AP, Budenz DL. (2016). A Statistical Model to Analyze Clinician Expert Consensus on Glaucoma Progression using Spatially Correlated Visual Field Data. Translational vision science & technology, 5(4)

Pingali SC, Warren JL, Mead AM, Sharova N, Petit S, Weinberger DM. (2016). Association Between Local Pediatric Vaccination Rates and Patterns of Pneumococcal Disease in Adults. The Journal of infectious diseases, 213(4)

Weinberger DM, Warren JL, Steiner CA, Charu V, Viboud C, Pitzer VE. (2015). Reduced-Dose Schedule of Prophylaxis Based on Local Data Provides Near-Optimal Protection Against Respiratory Syncytial Virus. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 61(4)

Chang HH, Warren JL, Darrow LA, Reich BJ, Waller LA. (2015). Assessment of critical exposure and outcome windows in time-to-event analysis with application to air pollution and preterm birth study. Biostatistics (Oxford, England), 16(3)

Warren JL, Fuentes M, Herring AH, Langlois PH. (2013). Air pollution metric analysis while determining susceptible periods of pregnancy for low birth weight. ISRN obstetrics and gynecology, (2013)

Warren JL, Luben TJ, Sanders AP, Brownstein NC, Herring AH, Meyer RE. (2013). An evaluation of metrics for assessing maternal exposure to agricultural pesticides. Journal of exposure science & environmental epidemiology, 24(5)

Warren JL, Perez-Heydrich C, Yunus M. (2013). Bayesian Spatial Design of Optimal Deep Tubewell Locations in Matlab, Bangladesh. Environmetrics, 24(6)

Warren J, Fuentes M, Herring A, Langlois P. (2012). Spatial-temporal modeling of the association between air pollution exposure and preterm birth: identifying critical windows of exposure. Biometrics, 68(4)

Warren J, Fuentes M, Herring A, Langlois P. (2012). Bayesian Spatial-temporal Model for Cardiac Congenital Anomalies and Ambient Air Pollution Risk Assessment. Environmetrics, 23(8)

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