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Sarah Cobey

Associate Professor

Education

Affiliations

Projects

Papers

Ranjeva S, Subramanian R, Fang VJ, Leung GM, Ip DKM, Perera RAPM, Peiris JSM, Cowling BJ, Cobey S. (2019). Age-specific differences in the dynamics of protective immunity to influenza. Nature communications, 10(1), https://github.com/cobeylab/Influenza-immune-dynamics/tree/master/Data

Lewnard JA, Cobey S. (2018). Immune History and Influenza Vaccine Effectiveness. Vaccines, 6(2)

Cobey S, Gouma S, Parkhouse K, Chambers BS, Ertl HC, Schmader KE, Halpin RA, Lin X, Stockwell TB, Das SR, Landon E, Tesic V, Youngster I, Pinsky BA, Wentworth DE, Hensley SE, Grad YH. (2018). Poor Immunogenicity, Not Vaccine Strain Egg Adaptation, May Explain the Low H3N2 Influenza Vaccine Effectiveness in 2012-2013. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 67(3)

Wen FT, Bell SM, Bedford T, Cobey S. (2018). Estimating Vaccine-Driven Selection in Seasonal Influenza. Viruses, 10(9), https://github.com/cobeylab/flu-vaccine-sieve

Cobey S, Grad YH. (2018). Response to Skowronski and De Serres. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 67(9)

Cobey S. (2018). Repeated Vaccination May Protect Children From Influenza Infection. JAMA network open, 1(6)

Vieira MC, Zinder D, Cobey S. (2018). Selection and Neutral Mutations Drive Pervasive Mutability Losses in Long-Lived Anti-HIV B-Cell Lineages. Molecular Biology and Evolution, 35(5)

Wilson PC, Cobey S. (2018). Characterization of the immunologic repertoire: A quick start guide. Immunological reviews, 284(1)

Baskerville EB, Cobey S. (2017). Does influenza drive absolute humidity?. Proceedings of the National Academy of Sciences of the United States of America, 114(12)

Ranjeva SL, Baskerville EB, Dukic V, Villa LL, Lazcano-Ponce E, Giuliano AR, Dwyer G, Cobey S. (2017). Recurring infection with ecologically distinct HPV types can explain high prevalence and diversity. Proceedings of the National Academy of Sciences of the United States of America, 114(51), https://github.com/cobeylab/HPV-model

Cobey S. (2017). Sick if you do, sick if you don't. Nature Ecology & Evolution, 1(11)

Cobey S, Hensley SE. (2017). Immune history and influenza virus susceptibility. Current Opinion in Virology

Cobey S, Baskerville EB, Colijn C, Hanage W, Fraser C, Lipsitch M. (2017). Host population structure and treatment frequency maintain balancing selection on drug resistance. Journal of the Royal Society, Interface, 14(133)

Wen F, Bedford T, Cobey S. (2016). Explaining the geographical origins of seasonal influenza A (H3N2). Proceedings. Biological sciences, 283(1838)

Childs LM, Baskerville EB, Cobey S. (2015). Trade-offs in antibody repertoires to complex antigens. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 370(1676)

Cobey S, Wilson P, Matsen FA 4th.. (2015). The evolution within us. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 370(1676)

Perron GG, Inglis RF, Pennings PS, Cobey S. (2015). Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health. Evolutionary Applications, 8(3)

Cobey S. (2014). Pathogen evolution and the immunological niche. Annals of the New York Academy of Sciences, 1320(1)

Cobey S, Lipsitch M. (2013). Pathogen diversity and hidden regimes of apparent competition. The American naturalist, 181(1)

Cobey S, Lipsitch M. (2012). Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes. Science (New York, N.Y.), 335(6074)

Cobey S, Pascual M. (2011). Consequences of host heterogeneity, epitope immunodominance, and immune breadth for strain competition. Journal of theoretical biology, 270(1)

Cobey S, Pascual M, Dieckmann U. (2010). Ecological factors driving the long-term evolution of influenza's host range. Proceedings. Biological sciences, 277(1695)

Cobey S, Baskerville EB. (2010). Limits to Causal Inference with State-Space Reconstruction for Infectious Disease. PloS one, 11(12)

Cobey S, Koelle K. (2008). Capturing escape in infectious disease dynamics. Trends in ecology & evolution, 23(10)