Chen J, Hoops S, Marathe A, Mortveit H, Lewis B, Venkatramanan S, Haddadan A, Bhattacharya P, Adiga A, Vullikanti A, Wilson M, Ehrlich G, Fenster M, Eubank S, Barrett C, Marathe M. (2021). Prioritizing allocation of COVID-19 vaccines based on social contacts increases vaccination effectiveness. medRxiv : the preprint server for health sciences

Chen J, Vullikanti A, Santos J, Venkatramanan S, Hoops S, Mortveit H, Lewis B, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Epidemiological and Economic Impact of COVID-19 in the US. medRxiv : the preprint server for health sciences

Chen J, Vullikanti A, Hoops S, Mortveit H, Lewis B, Venkatramanan S, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Medical costs of keeping the US economy open during COVID-19. Scientific reports, 10(1)

Adiga A, Venkatramanan S, Schlitt J, Peddireddy A, Dickerman A, Bura A, Warren A, Klahn BD, Mao C, Xie D, Machi D, Raymond E, Meng F, Barrow G, Mortveit H, Chen J, Walke J, Goldstein J, Wilson ML, Orr M, Porebski P, Telionis PA, Beckman R, Hoops S, Eubank S, Baek YY, Lewis B, Marathe M, Barrett C. (2020). Evaluating the impact of international airline suspensions on the early global spread of COVID-19. medRxiv : the preprint server for health sciences

Chen J, Vullikanti A, Hoops S, Mortveit H, Lewis B, Venkatramanan S, You W, Eubank S, Marathe M, Barrett C, Marathe A. (2020). Medical Costs of Keeping the US Economy Open During COVID-19. medRxiv : the preprint server for health sciences

Adiga A, Chu S, Eubank S, Kuhlman CJ, Lewis B, Marathe A, Marathe M, Nordberg EK, Swarup S, Vullikanti A, Wilson ML. (2018). Disparities in spread and control of influenza in slums of Delhi: findings from an agent-based modelling study. BMJ open, 8(1)

Chakraborty P, Lewis B, Eubank S, Brownstein JS, Marathe M, Ramakrishnan N. (2018). What to know before forecasting the flu. PLoS computational biology, 14(10)

Nath M, Ren Y, Khorramzadeh Y, Eubank S. (2018). Determining whether a class of random graphs is consistent with an observed contact network. Journal of theoretical biology, (440)

Dorratoltaj N, Nikin-Beers R, Ciupe SM, Eubank SG, Abbas KM. (2017). Multi-scale immunoepidemiological modeling of within-host and between-host HIV dynamics: systematic review of mathematical models. PeerJ, (5)

Powell Doherty R, Telionis PA, Müller-Demary D, Hosszu A, Duminica A, Bertke A, Lewis B, Eubank S. (2017). A survey of quality of life indicators in the Romanian Roma population following the 'Decade of Roma Inclusion'. F1000Research, (6)

Dorratoltaj N, Marathe A, Lewis BL, Swarup S, Eubank SG, Abbas KM. (2017). Epidemiological and economic impact of pandemic influenza in Chicago: Priorities for vaccine interventions. PLoS computational biology, 13(6)

Ren Y, Eubank S, Nath M. (2016). From network reliability to the Ising model: A parallel scheme for estimating the joint density of states. Physical review. E, 94(4-1)

Alexander KA, Sanderson CE, Marathe M, Lewis BL, Rivers CM, Shaman J, Drake JM, Lofgren E, Dato VM, Eisenberg MC, Eubank S. (2015). What factors might have led to the emergence of Ebola in West Africa?. PLoS neglected tropical diseases, 9(6)

Alam M, Deng X, Philipson C, Bassaganya-Riera J, Bisset K, Carbo A, Eubank S, Hontecillas R, Hoops S, Mei Y, Abedi V, Marathe M. (2015). Sensitivity Analysis of an ENteric Immunity SImulator (ENISI)-Based Model of Immune Responses to Helicobacter pylori Infection. PLoS One, 10(9)

Althouse BM, Scarpino SV, Meyers LA, Ayers JW, Bargsten M, Baumbach J, Brownstein JS, Castro L, Clapham H, Cummings DA, Del Valle S, Eubank S, Fairchild G, Finelli L, Generous N, George D, Harper DR, Hébert-Dufresne L, Johansson MA, Konty K, Lipsitch M, Milinovich G, Miller JD, Nsoesie EO, Olson DR, Paul M, Polgreen PM, Priedhorsky R, Read JM, Rodriguez-Barraquer I, Smith DJ, Stefansen C, Swerdlow DL, Thompson D, Vespignani A, Wesolowski A. (2015). Enhancing disease surveillance with novel data streams: challenges and opportunities. EPJ data science, (4)

Khorramzadeh Y, Youssef M, Eubank S, Mowlaei S. (2015). Analyzing network reliability using structural motifs. Physical review. E, Statistical, nonlinear, and soft matter physics, 91(4)

Lum K, Swarup S, Eubank S, Hawdon J. (2014). The contagious nature of imprisonment: an agent-based model to explain racial disparities in incarceration rates. Journal of the Royal Society, Interface, 11(98)

Halloran ME, Vespignani A, Bharti N, Feldstein LR, Alexander KA, Ferrari M, Shaman J, Drake JM, Porco T, Eisenberg JN, Del Valle SY, Lofgren E, Scarpino SV, Eisenberg MC, Gao D, Hyman JM, Eubank S, Longini IM Jr.. (2014). Ebola: mobility data. Science (New York, N.Y.), 346(6208)

Lofgren ET, Halloran ME, Rivers CM, Drake JM, Porco TC, Lewis B, Yang W, Vespignani A, Shaman J, Eisenberg JN, Eisenberg MC, Marathe M, Scarpino SV, Alexander KA, Meza R, Ferrari MJ, Hyman JM, Meyers LA, Eubank S. (2014). Opinion: Mathematical models: a key tool for outbreak response. Proceedings of the National Academy of Sciences of the United States of America, 111(51)

Eubank S, Youssef M, Khorramzadeh Y. (2014). Using the network reliability polynomial to characterize and design networks. Journal of complex networks, 2(4)

Rivers CM, Lofgren ET, Marathe M, Eubank S, Lewis BL. (2014). Modeling the impact of interventions on an epidemic of ebola in sierra leone and liberia. PLoS currents, (6)

Lee BY, Yilmaz SL, Wong KF, Bartsch SM, Eubank S, Song Y, Avery TR, Christie R, Brown ST, Epstein JM, Parker JI, Huang SS. (2013). Modeling the regional spread and control of vancomycin-resistant enterococci. American journal of infection control, 41(8)

Lewis B, Eubank S, Abrams AM, Kleinman K. (2013). in silico surveillance: evaluating outbreak detection with simulation models. BMC medical informatics and decision making, (13)

Marathe A, Chen J, Eubank S, Liao S, Ma Y. (2014). Impact of paid sick leave policy: a social planner's perspective. American journal of public health, 104(1)

Rivers C, Lum K, Lewis B, Eubank S. (2013). Estimating Human Cases of Avian Influenza A(H7N9) from Poultry Exposure. PLoS currents, (5)

Lewis B, Swarup S, Bisset K, Eubank S, Marathe M, Barrett C. A simulation environment for the dynamic evaluation of disaster preparedness policies and interventions. Journal of public health management and practice : JPHMP, (19 Suppl 2)

Parikh N, Youssef M, Swarup S, Eubank S. (2013). Modeling the effect of transient populations on epidemics in Washington DC. Scientific reports, (3)

Youssef M, Khorramzadeh Y, Eubank S. (2013). Network reliability: the effect of local network structure on diffusive processes. Physical review. E, Statistical, nonlinear, and soft matter physics, 88(5)

Barrett C, Bisset K, Chandan S, Chen J, Chungbaek Y, Eubank S, Evrenosoğlu Y, Lewis B, Lum K, Marathe A, Marathe M, Mortveit H, Parikh N, Phadke A, Reed J, Rivers C, Saha S, Stretz P, Swarup S, Thorp J, Vullikanti A, Xie D. . Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference, (2013)

Barrett CL, Eubank S, Marathe A, Marathe MV, Pan Z, Swarup S. Information Integration to Support Model-Based Policy Informatics. The innovation journal : the public sector innovation journal, 16(1)

Dubois T, Eubank S, Srinivasan A. (2012). The Effect of Random Edge Removal on Network Degree Sequence. Electronic journal of combinatorics, 19(1)

Alexander KA, Lewis BL, Marathe M, Eubank S, Blackburn JK. (2012). Modeling of wildlife-associated zoonoses: applications and caveats. Vector borne and zoonotic diseases (Larchmont, N.Y.), 12(12)

Wendelsdorf KV, Alam M, Bassaganya-Riera J, Bisset K, Eubank S, Hontecillas R, Hoops S, Marathe M. (2012). ENteric Immunity SImulator: a tool for in silico study of gastroenteric infections. IEEE transactions on nanobioscience, 11(3)

Marathe A, Lewis B, Barrett C, Chen J, Marathe M, Eubank S, Ma Y. (2011). Comparing effectiveness of top-down and bottom-up strategies in containing influenza. PLoS One, 6(9)

Lee BY, McGlone SM, Song Y, Avery TR, Eubank S, Chang CC, Bailey RR, Wagener DK, Burke DS, Platt R, Huang SS. (2011). Social network analysis of patient sharing among hospitals in Orange County, California. American journal of public health, 101(4)

Lee BY, McGlone SM, Wong KF, Yilmaz SL, Avery TR, Song Y, Christie R, Eubank S, Brown ST, Epstein JM, Parker JI, Burke DS, Platt R, Huang SS. (2011). Modeling the spread of methicillin-resistant Staphylococcus aureus (MRSA) outbreaks throughout the hospitals in Orange County, California. Infection control and hospital epidemiology, 32(6)

Marathe A, Lewis B, Chen J, Eubank S. (2011). Sensitivity of household transmission to household contact structure and size. PLoS One, 6(8)

Barrett CL, Channakeshava K, Eubank S, Anil Kumar VS, Marathe MV. (2011). From biological and social network metaphors to coupled bio-social wireless networks. International journal of autonomous and adaptive communications systems, 4(2)

Huang SS, Avery TR, Song Y, Elkins KR, Nguyen CC, Nutter SK, Nafday AA, Condon CJ, Chang MT, Chrest D, Boos J, Bobashev G, Wheaton W, Frank SA, Platt R, Lipsitch M, Bush RM, Eubank S, Burke DS, Lee BY. (2010). Quantifying interhospital patient sharing as a mechanism for infectious disease spread. Infection control and hospital epidemiology, 31(11)

Wendelsdorf K, Bassaganya-Riera J, Hontecillas R, Eubank S. (2010). Model of colonic inflammation: immune modulatory mechanisms in inflammatory bowel disease. Journal of theoretical biology, 264(4)

Eubank S, Barrett C, Beckman R, Bisset K, Durbeck L, Kuhlman C, Lewis B, Marathe A, Marathe M, Stretz P. (2010). Detail in network models of epidemiology: are we there yet?. Journal of biological dynamics, 4(5)

Feighner BH, Eubank S, Glass RJ, Davey VJ, Chrétien JP, Gaydos JC. (2009). Infectious disease modeling and military readiness. Emerging infectious diseases, 15(9)

Halloran ME, Ferguson NM, Eubank S, Longini IM Jr., Cummings DA, Lewis B, Xu S, Fraser C, Vullikanti A, Germann TC, Wagener D, Beckman R, Kadau K, Barrett C, Macken CA, Burke DS, Cooley P. (2008). Modeling targeted layered containment of an influenza pandemic in the United States. Proceedings of the National Academy of Sciences of the United States of America, 105(12)

Atkins K, Barrett CL, Beckman R, Bisset K, Chen J, Eubank S, Feng A, Feng X, Harris SD, Lewis B, Kumar VS, Marathe MV, Marathe A, Mortveit H, Stretz P. (2008). An Interaction Based Composable Architecture for Building Scalable Models of Large Social, Biological, Information and Technical Systems. CTWatch quarterly : cyberinfrastructure technology watch, 4(1)

Eubank S. (2005). Network based models of infectious disease spread. Japanese journal of infectious diseases, 58(6)

Eubank S, Guclu H, Kumar VS, Marathe MV, Srinivasan A, Toroczkai Z, Wang N. (2004). Modelling disease outbreaks in realistic urban social networks. Nature, 429(6988)

Theiler J, Eubank S. (1993). Don't bleach chaotic data. Chaos (Woodbury, N.Y.), 3(4)