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Ye Shen

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China

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Papers

Xu H, Yu G, Lu Y, Fuller H, Song S, Shen Y, Chiang CWK, Darst BF, Ye K. (2026). Polygenic predisposition modifies the associations of fish oil supplementation with circulating omega-3 fatty acids: a cross-sectional gene-diet interaction study in UK Biobank. medRxiv : the preprint server for health sciences

Carr CP, Gay JL, Ritchie M, Murrow L, Knight J, Shen Y, Tate AD. (2026). Pilot Implementation Results From a Community-Based Flood Resilience Exercise to Improve Individual Disaster Preparedness. Health promotion practice

Andrade FC, Shen Y, MacKillop JM, Beach SRH, vanDellen MR. (2026). Dyadic patterns of abstinence from smoking in dual-smoking couples enrolled in a pilot randomized clinical trial. Health psychology : official journal of the Division of Health Psychology, American Psychological Association

Ogunyemi KO, Shaikh AT, Bashir A, Dixon BE, Warmath D, Toth M, Salim J, Lokossou VK, Teferi F, Baer C, Brown J, Sogbossi LS, Zohra T, Tom-Aba D, Awori AS, Said AH, Chen Y, Antara S, Gebreyes WA, Winter AK, Ali H, Squires N, Kebede S, Asghar RJ, Chungong S, Alemu W, Aïssi MA, Sekandi JN, Wuhib T, Ohuabunwo C, Shen Y, McNabb SJN. (2026). Modernizing public health surveillance for global health security leveraging AI. Lancet regional health. Americas, (58)

Xu Q, Sung MH, Chen Z, Rajbhandari-Thapa J, Adams GB, Khan MM, Shen Y, Song X, Song X, Song S. (2026). Association between cumulative average BMI and cognitive decline: a 24-year cohort study. Journal of neurology, 273(2)

Chen Z, Li B, Chen Y, Liu J, Luo F, Ogunyemi KO, Ge Y, Ke Y, Yang Y, Chen X, Shen Y, . (2026). Mapping spatial and social inequities of long COVID across the United States: a retrospective cohort study. Lancet regional health. Americas, (56)

Miller SL, Billings WZ, John M, Hemme H, Atmar RL, Bernstein DI, Shen Y, Winter AK, Koelle K, Lopman BA, Handel A. (2026). Evaluation of serum antibodies as correlates of protection against norovirus infection and disease. The Journal of infectious diseases

Grajeda LM, Castellanos K, Díaz-Artiga A, López MR, Ramirez A, Petrovick T, Barraza-Villarreal A, Thompson LM, Jabbarzadeh S, Wang J, Waller L, Clark ML, Lovvorn AE, Eckhardt CM, Hoekstra NE, Johnson MA, Pillarisetti A, Prada D, Baccarelli AA, Shen Y, Knight J, Naeher LP, Clasen T, Peel J, Mccollum ED, Mccracken JP. (2026). Early-life liquefied petroleum gas cooking intervention and lung function in Guatemalan children: A randomized clinical trial. Annals of the American Thoracic Society

Ruan W, Lyu Y, Zhang J, Cai J, Shu P, Ge Y, Lu Y, Gao S, Wang Y, Wang P, Zhao L, Wang T, Liu Y, Fang L, Liu Z, Liu Z, Li Y, Wu Z, Chen J, Jiang H, Pan Y, Yang Z, Chen J, Liang S, Zhang W, Ma T, Dou Y, Zhang J, Gong X, Gan Q, Zou Y, Chen Z, Qian Y, Yu S, Lu J, Song K, Wang X, Sikora A, Li G, Li X, Li Q, Wang Y, Zhang L, Abate Y, He L, Zhong W, Liu R, Huang C, Liu W, Shen Y, Ma P, Zhu H, Yan Y, Zhu D, Liu T. (2026). Large language models for bioinformatics. Quantitative biology (Beijing, China), 14(1)

Zhao B, Shen Y, Henry K, Devlin JW, Murphy DJ, Smith SE, Murray B, Rowe S, Sikora A. (2026). A Data-Driven Medication Regimen Complexity Score for Critically Ill Patients: MRC-ICU 2.0. Pharmacotherapy, 46(8)

Cai J, Feng Y, Cheng H, Ge Y, Guo Z, Huang H, Li C, Li Y, Ling F, Martinez L, Ma P, Zhong W, Shen Y. (2026). Pseudo-time reconstruction for analyzing transmission direction in COVID-19 contact-tracing data. Epidemics, (55)

Murray B, Zhao B, Chen Z, Smith SE, Kong Y, Shen Y, Li S, Chen X, Sikora A, . (2026). Machine Learning-Based Prediction of Prolonged Duration of Mechanical Ventilation Using Medication Data. Pharmacotherapy

Song S, Sung MH, Diaz D, Lin Z, Tate AD, Chen Z, Rajbhandari-Thapa J, Adams GB, Khan MM, Shen Y, Renzi-Hammond LM, Jin Y. (2025). Long-term cumulative physical activity associated with less cognitive decline: Evidence from a 16-year cohort study. The journal of prevention of Alzheimer's disease

Nagawa CS, Luo F, Shen Y, MacKillop JM, Beach SRH, vanDellen M. (2025). Characterizing the Impact of Dyadic Motivations to Quit on Cessation Outcomes in Dual-Smoking Couples. Tobacco use insights, (18)

Li B, Ke Y, Chen X, Martinez L, Shen Y. (2025). Robust COVID-19 Mortality Risk Assessment: Validation of a Two-Step Algorithm from the National COVID Cohort Collaborative. The Journal of infectious diseases

Chen Z, Li B, Chen Y, Liu J, Luo F, Ogunyemi KO, Ge Y, Ke Y, Yang Y, Chen X, Shen Y. (2025). Mapping Long COVID: Spatial and Social Inequities Across the United States. medRxiv : the preprint server for health sciences

Wu S, Feng Y, Cheng H, Huang H, Li Y, Ling F, Ma P, Zhong W, Shen Y. (2025). Personalized risk score prediction and testing policy adaptations of a COVID-19 population-based contact tracing network. Epidemiology and infection, (153)

Martinez L, Campbell JI, Linde L, Boulahbal F, Cayla JA, Chakhaia T, Chan PC, Chen C, Fang CT, Fox G, Grandjean L, Hannoun D, Hesseling A, Horsburgh CR, Huang LM, Liu Q, Mazahir R, Lee CH, Lee LN, Bennet R, Nejat S, Gupta A, Das M, Murray M, Huang CC, Del Corral H, Benjumea-Bedoya D, Shen Y, Becerra M, Chang V, Krishnan S, Heinmueller P, Brewer T, Isaakidis P, Hauri AM, Shah L, Trieu L, Seddon JA. (2025). The Effectiveness of Isoniazid Preventive Treatment among Contacts of Multidrug-Resistant Tuberculosis: A Systematic Review and Individual-Participant Meta-Analysis. American journal of respiratory and critical care medicine

Zhang Y, Brenna JT, Shen Y, Ye K. (2025). Reply to: Comments on "Associations of plasma omega-6 and omega-3 fatty acids with overall and 19 site-specific cancers: A population-based cohort study in UK Biobank". International journal of cancer

Lu Y, Allen JD, Ross TM, Cowling B, Handel A, Ogunyemi K, Bruxvoort KJ, Ge Y, Shen Y. (2025). Evaluating the Breadth and Reliability of Influenza Vaccine Protection Indicators: a Secondary Analysis of an Animal Challenge Trial. The Journal of infectious diseases

Thapa K, Shen Y, Cordero JF, Vall EA, Rajbhandari-Thapa J. (2025). Prospective association of adverse childhood experiences and social support with all-cause mortality among young adults in the USA. Journal of epidemiology and community health

Tiwari BB, Matta J, Thomsen MR, Da L, Thapa K, Shen Y, Ingels JB, Rajbhandari-Thapa J. (2025). Physical activity level among male and female middle to high school students and impact of perceived school climate: a longitudinal analysis. Frontiers in public health, (13)

vanDellen MR, Wright JWC, Hampton BM, Ranby KW, Beach SRH, Shen Y, MacKillop JM. (2025). Mechanisms of change in a randomized control pilot study of partner-involved financial incentive treatments for dual-smoking couples. Health psychology : official journal of the Division of Health Psychology, American Psychological Association

Shen Y, Sung MH, Ge Y, Chen Y, Carlock MA, Hanley HB, Jiang S, Handel A, Ross TM. (2025). Predicting influenza vaccine-elicited antibody responses with practical point systems. Vaccine, (64)

Chen Y, Luo F, Martinez L, Jiang S, Shen Y. (2025). Identifying key aspects to enhance predictive modeling for early identification of schistosomiasis hotspots to guide mass drug administration. PLoS neglected tropical diseases, 19(7)

Wang J, Yu L, Yang Z, Shen P, Sun Y, Shui L, Tang M, Jin M, Chen B, Ge Y, Lin H, Shen Y, Chen K, Martinez L. (2025). Development of chronic obstructive pulmonary disease after a tuberculosis episode in a large, population-based cohort from Eastern China. International journal of epidemiology, 54(2)

Thapa K, Shen Y, Cordero JF, Vall EA, Rajbhandari-Thapa J. (2025). Associations between adverse childhood experiences and obesity among young US adults. Annals of epidemiology

vanDellen MR, Bales E, Hampton BM, Jain E, Shen Y, Jayawardhana J, Beach SRH, Chinchilla AH, MacKillop JM. (2025). Evaluating partner-involved financial incentive treatments for smoking cessation in dual-smoker couples: A randomized controlled trial protocol. Contemporary clinical trials

Billings WZ, Ge Y, Skarlupka AL, Miller SL, Hemme H, John M, Dean NE, Cobey S, Cowling BJ, Shen Y, Ross TM, Handel A. (2025). Different antigenic distance metrics generate similar predictions of influenza vaccine response breadth despite moderate correlation. PLoS computational biology, 21(11)

Ebell MH, Chen Y, Luo F, Shen Y, Coenen S, Little P, Barrett B, Merenstein D, Ieven M. (2025). Development and External Validation of the FluScoreVax Risk Score for Influenza That Incorporates Vaccine Status. Journal of the American Board of Family Medicine : JABFM

Ge Y, Zahid A, Kuchur R, Martinez L, Wang B, Zhang L, Aras S, Raynee P, Dike A, Navarro C, Lawrick C, Greer T, Twum F, Shen Y, Gipson J, Lemacks J. (2025). Using machine learning models to predict vaccine hesitancy: a showcase of COVID-19 vaccine hesitancy in rural populations during the pandemic. Vaccine, (66)

Zhu P, Chen X, Pan J, Wang W, Hao X, Xu B, Zhan B, Fang C, Shen Y, Liu K, Qiu X, Wang W, Chen B, Jiang J, Martinez L. (2025). Prognostic value of an abnormal chest X-ray result in predicting the development of tuberculosis. Nature communications, 16(1)

Billings WZ, Ge Y, Knight JH, Hemme H, Hammerton SM, Skarlupka AL, Cao W, Shen Y, Bahl J, Thomas PG, Ross TM, Handel A. (2025). High dose inactivated influenza vaccine inconsistently improves heterologous antibody responses in an elderly human cohort. The Journal of infectious diseases

Sikora A, Min W, Devlin JW, Hu M, Murphy DJ, Murray B, Zhao B, Shen Y, Chen X, Smith SE, Rowe S, Liu T, Li S, . (2025). Effect of Comprehensive Medication Management on Mortality in Critically Ill Patients. Critical care medicine

Cheng C, Chen X, Ge Y, Sung MH, Zhang Y, Ogunyemi K, Carlock MA, Hanley HB, Handel A, Ross TM, Shen Y. (2025). Assessing factors associated with one-year antibody waning in participants with repeated influenza vaccinations: A six-year cohort study. Vaccine, (68)

Zhao B, Shen Y, Devlin JW, Murphy DJ, Smith SE, Murray B, Rowe S, Sikora A. (2025). Prediction of pharmacist medication interventions using medication regimen complexity. JAMIA open, 8(6)

Ge Y, Handel A, Giabbanelli PJ, Lemacks J, Greer T, Raynee P, Bahl J, Skarlupka AL, Dobbin KK, Ross TM, Shen Y. (2025). Exploring bias due to below-limit-of-detection values in influenza vaccine antibody modeling: A case study and instructional guide for the CIVIC study. Vaccine, (49)

Chen C, Xue H, Horsburgh CR, Amour M, Hatherill M, Tameris M, von Reyn CF, Rees C, Shen Y, McShane H, García-Basteiro AL, Liu D, Wang Y, Nathavitharana RR, Graviss EA, Shao Y, Liu Q, Lu W, Zhu L, Martinez L. (2025). Trajectories of interferon-gamma release assay results over two years in independent cohorts from China, South Africa, Tanzania, and the United States. Chest

Wang H, Shen L, Liu T, Zhang R, Wang Z, Wei J, Shen Y, Guo J, Miles T, Li C, Zou Z. (2025). Genome-Wide Analysis of DNA Methylation Signatures Linking Prenatal Exposure to the Chinese Great Famine and Blood Lipids in Late Adulthood: The Genomic Research of the Chinese Famine (GRECF) Study. Nutrients, 17(19)

Lu Y, Xu H, Sun Y, Ihejirika SA, Chiang CW, Darst BF, Song S, Shen Y, Ye K. (2025). Gene-Diet Interaction Analysis in UK Biobank Identified Genetic Loci That Modify the Association Between Fish Oil Supplementation and the Incidence of Dementia. Current developments in nutrition, 9(9)

Ge Y, Lu Y, Allen JD, Einav T, Nkaleke DI, Bai F, Handel A, Ross TM, Shen Y. (2024). Pre-existing immunity to influenza aids ferrets in developing stronger and broader H3 vaccine-induced antibody responses. Vaccine

Lee J, Batson T, McCully KK, Shen Y, Modlesky CM. (2024). Elevated blood pressure in children with cerebral palsy and its relationship with adiposity and physical activity. Disability and health journal

Ge Y, Cao W, Sun S, Ross TM, Shen Y. (2024). The Seasonal Influenza Vaccine Cannot Trigger a Titer Increase Among Some Elderly Individuals. medRxiv : the preprint server for health sciences

Zhang Y, Sun Y, Song S, Khankari NK, Brenna JT, Shen Y, Ye K. (2024). Associations of plasma omega-6 and omega-3 fatty acids with overall and 19 site-specific cancers: A population-based cohort study in UK Biobank. International journal of cancer

Sun Y, McDonald T, Baur A, Xu H, Bateman NB, Shen Y, Li C, Ye K. (2024). Fish oil supplementation modifies the associations between genetically predicted and observed levels of blood lipids: a cross-sectional gene-diet interaction study in UK Biobank. The American journal of clinical nutrition

Hammerton SM, Billings WZ, Hemme H, Ross TM, Shen Y, Handel A. (2024). Estimating standard-dose and high-dose Fluzone vaccine efficacies for influenza A based on HAI titers. The Journal of infectious diseases

Uthman OA, Lyngse FP, Anjorin S, Hauer B, Hakki S, Martinez DA, Ge Y, Jonnerby J, Julin CH, Lin G, Lalvani A, Loss J, Madon KJ, Martinez L, Næss LM, Page KR, Prieto D, Robertson AH, Shen Y, Wurm J, Buchholz U. (2024). Susceptibility and infectiousness of SARS-CoV-2 in children versus adults, by variant (wild-type, alpha, delta): A systematic review and meta-analysis of household contact studies. PloS one, 19(9)

Zhang Y, Sun Y, Yu Q, Song S, Brenna JT, Shen Y, Ye K. (2024). Higher ratio of plasma omega-6/omega-3 fatty acids is associated with greater risk of all-cause, cancer, and cardiovascular mortality: A population-based cohort study in UK Biobank. eLife, (12)

Liang D, Liu J, Shen Y, Guan Y. (2024). Nonparametric second-order estimation for spatiotemporal point patterns. Biometrics, 80(3)

Sun Y, McDonald T, Baur A, Xu H, Bateman NB, Shen Y, Li C, Ye K. (2023). Fish oil supplementation modifies the genetic potential for blood lipids. medRxiv : the preprint server for health sciences

vanDellen MR, Wright JWC, Zhao B, Cullinan C, Beach SRH, Shen Y, Haskins LAB, Schiavone WM, MacKillop JM. (2023). Partner-Involved Financial Incentives for Smoking Cessation in Dual Smoker Couples: A Randomized Pilot Trial. Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco

Sung MH, Billings W, Carlock MA, Hanley HB, Bahl J, Handel A, Ross TM, Shen Y. (2023). Assessment of humoral immune responses to repeated influenza vaccination in a multiyear cohort: a five-year follow-up. The Journal of infectious diseases

Sikora A, Zhao B, Kong Y, Murray B, Shen Y. (2023). Machine learning based prediction of prolonged duration of mechanical ventilation incorporating medication data. medRxiv : the preprint server for health sciences

Li C, Miles TP, Shen Y, Bayakly R, Ido M, Khan MM. (2023). Measuring bereavement prevalence in a complex sampling survey: the 2019 Georgia Behavioral Risk Factor Surveillance System (BRFSS). BMC medical research methodology, 23(1)

Son H, Zhang D, Shen Y, Jaysing A, Zhang J, Chen Z, Mu L, Liu J, Rajbhandari-Thapa J, Li Y, Pagán JA. (2023). Social Determinants of Cardiovascular Health: A Longitudinal Analysis of Cardiovascular Disease Mortality in US Counties From 2009 to 2018. Journal of the American Heart Association, 12(2)

Liu Q, You N, Wen J, Wang J, Ge Y, Shen Y, Ding X, Lu P, Chen C, Zhu B, Zhu L, Lu W, Martinez L. (2023). Yield and Efficiency of a Population-Based Mass Tuberculosis Screening Intervention Among Persons With Diabetes in Jiangsu Province, China. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 77(1)

Linger RMA, Fadare JO, Shen Y, Van Winkle LJ. (2023). Editorial: Emerging talents in pharmacology: Drugs outcomes research and policies 2022. Frontiers in pharmacology, (14)

Ebell MH, Forgacs D, Shen Y, Ross TM, Hulme C, Bentivegna M, Hanley HB, Jefferson AM, Hainess L. High Prevalence of Both Previous Infection with SARS-CoV-2 and Persistent Symptoms. Journal of the American Board of Family Medicine : JABFM, 35(3)

Rajbhandari-Thapa J, Thapa K, Li Y, Ingels JB, Shi L, Zhang D, Shen Y, Chiang K. (2022). Electronic Vapor Product Use and Levels of Physical Activity Among High School Students in Georgia. Tobacco use insights, (15)

Tan J, Ge Y, Martinez L, Sun J, Li C, Westbrook A, Chen E, Pan J, Li Y, Cheng W, Ling F, Chen Z, Shen Y, Huang H. (2022). Transmission roles of symptomatic and asymptomatic COVID-19 cases: a modelling study. Epidemiology and infection, (150)

Tan J, Shen Y, Ge Y, Martinez L, Huang H. (2022). Age-related model for estimating the symptomatic and asymptomatic transmissibility of COVID-19 patients. Biometrics

Westbrook A, Zhang R, Shi M, Razavi AC, Huang Z, Chen J, He J, Kelly T, Shen Y, Li C. (2022). Association Between Baseline Buccal Telomere Length and Progression of Kidney Function: The Health and Retirement Study. The journals of gerontology. Series A, Biological sciences and medical sciences, 77(3)

Li Y, Kong Y, Ebell MH, Martinez L, Cai X, Lennon RP, Tarn DM, Mainous AG, Zgierska AE, Barrett B, Tuan WJ, Maloy K, Goyal M, Krist AH, Gal TS, Sung MH, Li C, Jin Y, Shen Y. (2022). Development and Validation of a Two-Step Predictive Risk Stratification Model for Coronavirus Disease 2019 In-hospital Mortality: A Multicenter Retrospective Cohort Study. Frontiers in medicine, (9)

Zhang D, Rajbhandari-Thapa J, Panda S, Chen Z, Shi L, Li Y, Shen Y, Ghimire R, Emerson KG. (2021). Linguistic Isolation and Mortality in Older Mexican Americans: Findings from the Hispanic Established Populations Epidemiologic Studies of the Elderly. Health equity, 5(1)

Shen Y, Li C, Ling F. (2021). Community Outbreak Investigation of SARS-CoV-2 Transmission Among Bus Riders in Eastern China-More Detailed Studies Are Needed-Reply. JAMA internal medicine, 181(5)

Ge Y, Martinez L, Sun S, Chen Z, Zhang F, Li F, Sun W, Chen E, Pan J, Li C, Sun J, Handel A, Ling F, Shen Y. (2021). COVID-19 Transmission Dynamics Among Close Contacts of Index Patients With COVID-19: A Population-Based Cohort Study in Zhejiang Province, China. JAMA internal medicine

Li C, Shen Y, Xiao Q, Rathbun SL, Huang H, Guan Y. (2022). Mean corrected generalized estimating equations for longitudinal binary outcomes with report bias. Statistical methods in medical research, 31(2)

Ge Y, Chen Z, Handel A, Martinez L, Xiao Q, Li C, Chen E, Pan J, Li Y, Ling F, Shen Y. (2021). The impact of social distancing, contact tracing, and case isolation interventions to suppress the COVID-19 epidemic: A modeling study. Epidemics, (36)

Liu Q, You N, Pan H, Shen Y, Lu P, Wang J, Lu W, Zhu L, Martinez L. (2021). Glycemic Trajectories and Treatment Outcomes of Patients with Newly Diagnosed Tuberculosis: A Prospective Study in Eastern China. American journal of respiratory and critical care medicine, 204(3)

Ge Y, Sun S, Shen Y. (2021). Estimation of case-fatality rate in COVID-19 patients with hypertension and diabetes mellitus in the New York State: a preliminary report. Epidemiology and infection

Cheng Y, Li Y, Lee Smith M, Li C, Shen Y. (2021). Analyzing evidence-based falls prevention data with significant missing information using variable selection after multiple imputation. Journal of applied statistics, 50(3)

Sung MH, Shen Y, Handel A, Bahl J, Ross TM. (2021). Longitudinal Assessment of Immune Responses to Repeated Annual Influenza Vaccination in a Human Cohort of Adults and Teenagers. Frontiers in immunology, (12)

Kahler J, Heckman TG, Shen Y, Huckans MS, Feldstein Ewing SW, Parsons JT, Phelps A, Sutton M, Holloway J, Lovejoy TI. (2020). Randomized controlled trial protocol for project BRIDGE: A telephone-administered motivational interviewing intervention targeting risky sexual behavior in older people living with HIV. Contemporary clinical trials, (95)

Shen Y, Li C, Dong H, Wang Z, Martinez L, Sun Z, Handel A, Chen Z, Chen E, Ebell MH, Wang F, Yi B, Wang H, Wang X, Wang A, Chen B, Qi Y, Liang L, Li Y, Ling F, Chen J, Xu G. (2020). Community Outbreak Investigation of SARS-CoV-2 Transmission Among Bus Riders in Eastern China. JAMA internal medicine

McKay B, Ebell M, Billings WZ, Dale AP, Shen Y, Handel A. (2020). Associations Between Relative Viral Load at Diagnosis and Influenza A Symptoms and Recovery. Open forum infectious diseases, 7(11)

Zhang R, Shen L, Miles T, Shen Y, Cordero J, Qi Y, Liang L, Li C. (2020). Association of Low to Moderate Alcohol Drinking With Cognitive Functions From Middle to Older Age Among US Adults. JAMA network open, 3(6)

Shen Y, Xu W, Li C, Handel A, Martinez L, Ling F, Ebell M, Fu X, Pan J, Ren J, Gu W, Chen E. (2020). A Cluster of Novel Coronavirus Disease 2019 Infections Indicating Person-to-Person Transmission Among Casual Contacts From Social Gatherings: An Outbreak Case-Contact Investigation. Open forum infectious diseases, 7(6)

Zhang D, Son H, Shen Y, Chen Z, Rajbhandari-Thapa J, Li Y, Eom H, Bu D, Mu L, Li G, Pagán JA. (2020). Assessment of Changes in Rural and Urban Primary Care Workforce in the United States From 2009 to 2017. JAMA network open, 3(10)

Liu Q, Lu P, Shen Y, Li C, Wang J, Zhu L, Lu W, Martinez L. (2021). Collateral Impact of the Coronavirus Disease 2019 (COVID-19) Pandemic on Tuberculosis Control in Jiangsu Province, China. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 73(3)

Liang L, Li C, Shen Y, Rong H, Jing H, Tong Z. (2020). Long-Term Trends in Hospitalization and Outcomes in Adult Patients with Exacerbation of Chronic Obstructive Pulmonary Disease in Beijing, China, from 2008 to 2017. International journal of chronic obstructive pulmonary disease, (15)

McKay B, Ebell M, Dale AP, Shen Y, Handel A. (2020). Virulence-mediated infectiousness and activity trade-offs and their impact on transmission potential of influenza patients. Proceedings. Biological sciences, 287(1927)

Cheng W, Pan A, Rathbun SL, Ge Y, Xiao Q, Martinez L, Ling F, Liu S, Wang X, Yu Z, Ebell MH, Li C, Handel A, Chen E, Shen Y. (2020). Effectiveness of Neuraminidase Inhibitors to Prevent Mortality in Laboratory-Confirmed Avian Influenza A H7N9 Patients. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases

Kittur N, Campbell CH, Binder S, Shen Y, Wiegand RE, Mwanga JR, Kinung'hi SM, Musuva RM, Odiere MR, Matendechero SH, Knopp S, Colley DG. (2020). Discovering, Defining, and Summarizing Persistent Hotspots in SCORE Studies. The American journal of tropical medicine and hygiene, 103(1_Suppl)

Marchello CS, Ebell MH, McKay B, Shen Y, Harvill ET, Whalen CC. (2019). Clinical management decisions for adults with prolonged acute cough: Frequency and associated factors. The American journal of emergency medicine, 37(9)

Martinez L, Shen Y, Handel A, Chakraburty S, Stein CM, Malone LL, Boom WH, Quinn FD, Joloba ML, Whalen CC, Zalwango S. (2018). Effectiveness of WHO's pragmatic screening algorithm for child contacts of tuberculosis cases in resource-constrained settings: a prospective cohort study in Uganda. The Lancet. Respiratory medicine, 6(4)

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