
Anil Vullikanti
Professor
University of Virginia Continue Reading Anil Vullikanti
Forecasting influenza activity using machine-learned mobility map.
Human mobility is a primary driver of infectious disease spread. However, existing data is limited in availability, coverage, granularity, and timeliness. Data-driven forecasts of disease dynamics are crucial for decision-making by health officials and private citizens alike. In this work, we focus on a machine-learned anonymized mobility map (hereon referred to as AMM) aggregated over hundreds of millions of smartphones and evaluate its utility in forecasting epidemics. We factor AMM into a metapopulation model to retrospectively forecast influenza in the USA and Australia. We show that the AMM model performs on-par with those based on commuter surveys, which are sparsely available and expensive. We also compare it with gravity and radiation based models of mobility, and find that the radiation model's performance is quite similar to AMM and commuter flows. Additionally, we demonstrate our model's ability to predict disease spread even across state boundaries. Our work contributes towards developing timely infectious disease forecasting at a global scale using human mobility datasets expanding their applications in the area of infectious disease epidemiology.
Nature communications
Venkatramanan S, Sadilek A, Fadikar A, Barrett CL, Biggerstaff M, Chen J, Dotiwalla X, Eastham P, Gipson B, Higdon D, Kucuktunc O, Lieber A, Lewis BL, Reynolds Z, Vullikanti AK, Wang L, Marathe M. (2021). Forecasting influenza activity using machine-learned mobility map. Nature communications, 12(1)

Professor
University of Virginia Continue Reading Anil Vullikanti

Research Associate Professor
University of Virginia Continue Reading Jiangzhuo Chen

Professor
University of Virginia Continue Reading Madhav Marathe

Epidemiologist/Team Lead
U.S. Department of Health and Human Services Continue Reading Matthew Biggerstaff

Research Scientist
University of Virginia Continue Reading Srinivasan Venkatramanan